Gene : Phvul.010G025900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13068:SF21 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  258
Name:  ? Phvul.010G025900 Secondary Identifier:  ? PAC:37144143
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G025900 0.5kb upstream 0.5kb upstream 1953 true Chr10: 3807319-3809271 Phaseolus vulgaris
Phvul.010G025900 0.5kb upstream 0.5kb upstream 500 false Chr10: 3807319-3807818 Phaseolus vulgaris
Phvul.010G025900 0.5kb downstream 0.5kb downstream 1953 true Chr10: 3807819-3809771 Phaseolus vulgaris
Phvul.010G025900 0.5kb downstream 0.5kb downstream 500 false Chr10: 3809272-3809771 Phaseolus vulgaris
Phvul.010G025900 1.0kb upstream 1.0kb upstream 2453 true Chr10: 3806819-3809271 Phaseolus vulgaris
Phvul.010G025900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3806819-3807818 Phaseolus vulgaris
Phvul.010G025900 1.0kb downstream 1.0kb downstream 2453 true Chr10: 3807819-3810271 Phaseolus vulgaris
Phvul.010G025900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3809272-3810271 Phaseolus vulgaris
Phvul.010G025900 2.0kb upstream 2.0kb upstream 3453 true Chr10: 3805819-3809271 Phaseolus vulgaris
Phvul.010G025900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3805819-3807818 Phaseolus vulgaris
Phvul.010G025900 2.0kb downstream 2.0kb downstream 3453 true Chr10: 3807819-3811271 Phaseolus vulgaris
Phvul.010G025900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3809272-3811271 Phaseolus vulgaris
Phvul.010G025900 5.0kb upstream 5.0kb upstream 6453 true Chr10: 3802819-3809271 Phaseolus vulgaris
Phvul.010G025900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3802819-3807818 Phaseolus vulgaris
Phvul.010G025900 5.0kb downstream 5.0kb downstream 6453 true Chr10: 3807819-3814271 Phaseolus vulgaris
Phvul.010G025900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3809272-3814271 Phaseolus vulgaris
Phvul.010G025900 10.0kb upstream 10.0kb upstream 11453 true Chr10: 3797819-3809271 Phaseolus vulgaris
Phvul.010G025900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3797819-3807818 Phaseolus vulgaris
Phvul.010G025900 10.0kb downstream 10.0kb downstream 11453 true Chr10: 3807819-3819271 Phaseolus vulgaris
Phvul.010G025900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3809272-3819271 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301955 5265 Fabidae View MSA
124064598 5270 Rosid View MSA
123738897 5271 Pentapetalae View MSA
122792635 5272 Eudicot View MSA
122042563 5273 Angiosperm View MSA
121309987 5274 Embryophyte View MSA
123347599 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58867 0.0 5.31599    
cufflinks 2.31175 0.0 7.43569   High
cufflinks 1.08937 0.0 3.79964    
cufflinks 1.20832 0.0 4.20767    
cufflinks 1.30332 0.0 4.50324    
cufflinks 0.76721 0.0 2.77712   Low
cufflinks 1.14743 0.0 4.00299    
cufflinks 1.40442 0.0 4.77101    
cufflinks 0.890029 0.0 3.19785   Low
cufflinks 1.17869 0.0 4.09383    
cufflinks 0.950213 0.0 3.3889    

0 Strain