Gene : Phvul.005G171100 P. vulgaris v2.1
Genomic Order:  1603 Name:  ? Phvul.005G171100
Secondary Identifier:  ? PAC:37153819
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G171100 0.5kb upstream 0.5kb upstream 1048 true Chr05: 39689756-39690803 Phaseolus vulgaris
Phvul.005G171100 0.5kb upstream 0.5kb upstream 500 false Chr05: 39689756-39690255 Phaseolus vulgaris
Phvul.005G171100 0.5kb downstream 0.5kb downstream 1048 true Chr05: 39690256-39691303 Phaseolus vulgaris
Phvul.005G171100 0.5kb downstream 0.5kb downstream 500 false Chr05: 39690804-39691303 Phaseolus vulgaris
Phvul.005G171100 1.0kb upstream 1.0kb upstream 1548 true Chr05: 39689256-39690803 Phaseolus vulgaris
Phvul.005G171100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39689256-39690255 Phaseolus vulgaris
Phvul.005G171100 1.0kb downstream 1.0kb downstream 1548 true Chr05: 39690256-39691803 Phaseolus vulgaris
Phvul.005G171100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39690804-39691803 Phaseolus vulgaris
Phvul.005G171100 2.0kb upstream 2.0kb upstream 2548 true Chr05: 39688256-39690803 Phaseolus vulgaris
Phvul.005G171100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39688256-39690255 Phaseolus vulgaris
Phvul.005G171100 2.0kb downstream 2.0kb downstream 2548 true Chr05: 39690256-39692803 Phaseolus vulgaris
Phvul.005G171100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39690804-39692803 Phaseolus vulgaris
Phvul.005G171100 5.0kb upstream 5.0kb upstream 5548 true Chr05: 39685256-39690803 Phaseolus vulgaris
Phvul.005G171100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39685256-39690255 Phaseolus vulgaris
Phvul.005G171100 5.0kb downstream 5.0kb downstream 5548 true Chr05: 39690256-39695803 Phaseolus vulgaris
Phvul.005G171100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39690804-39695803 Phaseolus vulgaris
Phvul.005G171100 10.0kb upstream 10.0kb upstream 10548 true Chr05: 39680256-39690803 Phaseolus vulgaris
Phvul.005G171100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39680256-39690255 Phaseolus vulgaris
Phvul.005G171100 10.0kb downstream 10.0kb downstream 10548 true Chr05: 39690256-39700803 Phaseolus vulgaris
Phvul.005G171100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39690804-39700803 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313487 5265 Fabidae View MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.61564 0.0 12.851   High
cufflinks 5.61123 0.0 19.1245   High
cufflinks 0.161821 0.0 0.755816 Low  
cufflinks 0.708888 0.0 2.89288    
cufflinks 0.355925 0.0 1.5589 Low  
cufflinks 1.22695 0.0 4.79068    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.314413 0.0 1.37671 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0522501 0.0 0.27948 Low Low
cufflinks 0.817072 0.0 3.3131    

0 Strain