Gene : Phvul.005G161100 P. vulgaris v2.1
Defline:  (1 of 3) K02140 - F-type H+-transporting ATPase subunit g (ATPeFG, ATP5L, ATP20) Genomic Order:  1507
Name:  ? Phvul.005G161100 Secondary Identifier:  ? PAC:37153263
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G161100 0.5kb upstream 0.5kb upstream 2634 true Chr05: 38932775-38935408 Phaseolus vulgaris
Phvul.005G161100 0.5kb upstream 0.5kb upstream 500 false Chr05: 38932775-38933274 Phaseolus vulgaris
Phvul.005G161100 0.5kb downstream 0.5kb downstream 2634 true Chr05: 38933275-38935908 Phaseolus vulgaris
Phvul.005G161100 0.5kb downstream 0.5kb downstream 500 false Chr05: 38935409-38935908 Phaseolus vulgaris
Phvul.005G161100 1.0kb upstream 1.0kb upstream 3134 true Chr05: 38932275-38935408 Phaseolus vulgaris
Phvul.005G161100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38932275-38933274 Phaseolus vulgaris
Phvul.005G161100 1.0kb downstream 1.0kb downstream 3134 true Chr05: 38933275-38936408 Phaseolus vulgaris
Phvul.005G161100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38935409-38936408 Phaseolus vulgaris
Phvul.005G161100 2.0kb upstream 2.0kb upstream 4134 true Chr05: 38931275-38935408 Phaseolus vulgaris
Phvul.005G161100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38931275-38933274 Phaseolus vulgaris
Phvul.005G161100 2.0kb downstream 2.0kb downstream 4134 true Chr05: 38933275-38937408 Phaseolus vulgaris
Phvul.005G161100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38935409-38937408 Phaseolus vulgaris
Phvul.005G161100 5.0kb upstream 5.0kb upstream 7134 true Chr05: 38928275-38935408 Phaseolus vulgaris
Phvul.005G161100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38928275-38933274 Phaseolus vulgaris
Phvul.005G161100 5.0kb downstream 5.0kb downstream 7134 true Chr05: 38933275-38940408 Phaseolus vulgaris
Phvul.005G161100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38935409-38940408 Phaseolus vulgaris
Phvul.005G161100 10.0kb upstream 10.0kb upstream 12134 true Chr05: 38923275-38935408 Phaseolus vulgaris
Phvul.005G161100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38923275-38933274 Phaseolus vulgaris
Phvul.005G161100 10.0kb downstream 10.0kb downstream 12134 true Chr05: 38933275-38945408 Phaseolus vulgaris
Phvul.005G161100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38935409-38945408 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314153 5265 Fabidae View MSA
124036896 5270 Rosid View MSA
123750868 5271 Pentapetalae View MSA
122796122 5272 Eudicot View MSA
122043209 5273 Angiosperm View MSA
121346657 5274 Embryophyte View MSA
123428530 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.983042 0.0 3.88501    
cufflinks 0.749358 0.0 3.02469    
cufflinks 0.934159 0.0 3.7076    
cufflinks 1.92137 0.0 7.18873   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.688366 0.0 2.79734    
cufflinks 0.0989621 0.0 0.484669 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.417223 0.0 1.76424 Low  
cufflinks 0.237633 0.0 1.0656 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain