Gene : Phvul.005G161700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  1513
Name:  ? Phvul.005G161700 Secondary Identifier:  ? PAC:37152921
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G161700 0.5kb upstream 0.5kb upstream 4446 true Chr05: 38967090-38971535 Phaseolus vulgaris
Phvul.005G161700 0.5kb upstream 0.5kb upstream 500 false Chr05: 38967090-38967589 Phaseolus vulgaris
Phvul.005G161700 0.5kb downstream 0.5kb downstream 4446 true Chr05: 38967590-38972035 Phaseolus vulgaris
Phvul.005G161700 0.5kb downstream 0.5kb downstream 500 false Chr05: 38971536-38972035 Phaseolus vulgaris
Phvul.005G161700 1.0kb upstream 1.0kb upstream 4946 true Chr05: 38966590-38971535 Phaseolus vulgaris
Phvul.005G161700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38966590-38967589 Phaseolus vulgaris
Phvul.005G161700 1.0kb downstream 1.0kb downstream 4946 true Chr05: 38967590-38972535 Phaseolus vulgaris
Phvul.005G161700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38971536-38972535 Phaseolus vulgaris
Phvul.005G161700 2.0kb upstream 2.0kb upstream 5946 true Chr05: 38965590-38971535 Phaseolus vulgaris
Phvul.005G161700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38965590-38967589 Phaseolus vulgaris
Phvul.005G161700 2.0kb downstream 2.0kb downstream 5946 true Chr05: 38967590-38973535 Phaseolus vulgaris
Phvul.005G161700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38971536-38973535 Phaseolus vulgaris
Phvul.005G161700 5.0kb upstream 5.0kb upstream 8946 true Chr05: 38962590-38971535 Phaseolus vulgaris
Phvul.005G161700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38962590-38967589 Phaseolus vulgaris
Phvul.005G161700 5.0kb downstream 5.0kb downstream 8946 true Chr05: 38967590-38976535 Phaseolus vulgaris
Phvul.005G161700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38971536-38976535 Phaseolus vulgaris
Phvul.005G161700 10.0kb upstream 10.0kb upstream 13946 true Chr05: 38957590-38971535 Phaseolus vulgaris
Phvul.005G161700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38957590-38967589 Phaseolus vulgaris
Phvul.005G161700 10.0kb downstream 10.0kb downstream 13946 true Chr05: 38967590-38981535 Phaseolus vulgaris
Phvul.005G161700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38971536-38981535 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305039 5265 Fabidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.93137 0.0 26.6998    
cufflinks 18.0656 0.0 46.938    
cufflinks 5.72351 0.0 16.1353   Low
cufflinks 28.0178 0.0 72.4211   High
cufflinks 9.72992 0.0 26.3358    
cufflinks 12.3762 0.0 32.7571    
cufflinks 18.1504 0.0 47.163    
cufflinks 11.6025 0.0 30.8007    
cufflinks 22.5184 0.0 58.2778   High
cufflinks 16.7086 0.0 43.5667    
cufflinks 14.001 0.0 36.8949    

0 Strain