Gene : Phvul.010G015400 P. vulgaris v2.1
Defline:  (1 of 2) 1.2.1.41//2.7.2.11 - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase // Glutamate 5-kinase / Gamma-glutamyl kinase Genomic Order:  144
Name:  ? Phvul.010G015400 Secondary Identifier:  ? PAC:37142954
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGININE-SYN4-PWY Phaseolus vulgaris pathologic  
Pvulgaris CITRULBIO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PROSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3341 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6922 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G015400 0.5kb upstream 0.5kb upstream 11493 true Chr10: 2305356-2316848 Phaseolus vulgaris
Phvul.010G015400 0.5kb upstream 0.5kb upstream 500 false Chr10: 2305356-2305855 Phaseolus vulgaris
Phvul.010G015400 0.5kb downstream 0.5kb downstream 11493 true Chr10: 2305856-2317348 Phaseolus vulgaris
Phvul.010G015400 0.5kb downstream 0.5kb downstream 500 false Chr10: 2316849-2317348 Phaseolus vulgaris
Phvul.010G015400 1.0kb upstream 1.0kb upstream 11993 true Chr10: 2304856-2316848 Phaseolus vulgaris
Phvul.010G015400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2304856-2305855 Phaseolus vulgaris
Phvul.010G015400 1.0kb downstream 1.0kb downstream 11993 true Chr10: 2305856-2317848 Phaseolus vulgaris
Phvul.010G015400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2316849-2317848 Phaseolus vulgaris
Phvul.010G015400 2.0kb upstream 2.0kb upstream 12993 true Chr10: 2303856-2316848 Phaseolus vulgaris
Phvul.010G015400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2303856-2305855 Phaseolus vulgaris
Phvul.010G015400 2.0kb downstream 2.0kb downstream 12993 true Chr10: 2305856-2318848 Phaseolus vulgaris
Phvul.010G015400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2316849-2318848 Phaseolus vulgaris
Phvul.010G015400 5.0kb upstream 5.0kb upstream 15993 true Chr10: 2300856-2316848 Phaseolus vulgaris
Phvul.010G015400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2300856-2305855 Phaseolus vulgaris
Phvul.010G015400 5.0kb downstream 5.0kb downstream 15993 true Chr10: 2305856-2321848 Phaseolus vulgaris
Phvul.010G015400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2316849-2321848 Phaseolus vulgaris
Phvul.010G015400 10.0kb upstream 10.0kb upstream 20993 true Chr10: 2295856-2316848 Phaseolus vulgaris
Phvul.010G015400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2295856-2305855 Phaseolus vulgaris
Phvul.010G015400 10.0kb downstream 10.0kb downstream 20993 true Chr10: 2305856-2326848 Phaseolus vulgaris
Phvul.010G015400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2316849-2326848 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309637 5265 Fabidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.81221 0.0 25.7801    
cufflinks 8.75445 0.0 23.2022    
cufflinks 10.8389 0.0 28.313    
cufflinks 1.91839 0.0 5.95618    
cufflinks 5.77952 0.0 15.9258    
cufflinks 2.54025 0.0 7.54556    
cufflinks 0.805456 0.0 2.73904   Low
cufflinks 0.295763 0.0 1.1017 Low Low
cufflinks 0.772093 0.0 2.64506   Low
cufflinks 11.3698 0.0 29.7044    
cufflinks 8.19745 0.0 21.933    

0 Strain