Gene : Phvul.005G161900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12565:SF174 - TRANSCRIPTION FACTOR BHLH87 Genomic Order:  1515
Name:  ? Phvul.005G161900 Secondary Identifier:  ? PAC:37153580
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G161900 0.5kb upstream 0.5kb upstream 2321 true Chr05: 38986820-38989140 Phaseolus vulgaris
Phvul.005G161900 0.5kb upstream 0.5kb upstream 500 false Chr05: 38986820-38987319 Phaseolus vulgaris
Phvul.005G161900 0.5kb downstream 0.5kb downstream 2321 true Chr05: 38987320-38989640 Phaseolus vulgaris
Phvul.005G161900 0.5kb downstream 0.5kb downstream 500 false Chr05: 38989141-38989640 Phaseolus vulgaris
Phvul.005G161900 1.0kb upstream 1.0kb upstream 2821 true Chr05: 38986320-38989140 Phaseolus vulgaris
Phvul.005G161900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38986320-38987319 Phaseolus vulgaris
Phvul.005G161900 1.0kb downstream 1.0kb downstream 2821 true Chr05: 38987320-38990140 Phaseolus vulgaris
Phvul.005G161900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38989141-38990140 Phaseolus vulgaris
Phvul.005G161900 2.0kb upstream 2.0kb upstream 3821 true Chr05: 38985320-38989140 Phaseolus vulgaris
Phvul.005G161900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38985320-38987319 Phaseolus vulgaris
Phvul.005G161900 2.0kb downstream 2.0kb downstream 3821 true Chr05: 38987320-38991140 Phaseolus vulgaris
Phvul.005G161900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38989141-38991140 Phaseolus vulgaris
Phvul.005G161900 5.0kb upstream 5.0kb upstream 6821 true Chr05: 38982320-38989140 Phaseolus vulgaris
Phvul.005G161900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38982320-38987319 Phaseolus vulgaris
Phvul.005G161900 5.0kb downstream 5.0kb downstream 6821 true Chr05: 38987320-38994140 Phaseolus vulgaris
Phvul.005G161900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38989141-38994140 Phaseolus vulgaris
Phvul.005G161900 10.0kb upstream 10.0kb upstream 11821 true Chr05: 38977320-38989140 Phaseolus vulgaris
Phvul.005G161900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38977320-38987319 Phaseolus vulgaris
Phvul.005G161900 10.0kb downstream 10.0kb downstream 11821 true Chr05: 38987320-38999140 Phaseolus vulgaris
Phvul.005G161900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38989141-38999140 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041087 5273 Angiosperm View MSA
122312756 5265 Fabidae View MSA
124065230 5270 Rosid View MSA
123741296 5271 Pentapetalae View MSA
122791069 5272 Eudicot View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0406178 0.0 0.188296 Low  
cufflinks 0.254364 0.0 0.997544 Low  
cufflinks 0.374726 0.0 1.43503 Low  
cufflinks 0.0788929 0.0 0.34554 Low  
cufflinks 2.46959 0.0 7.79097   High
cufflinks 0.782277 0.0 2.79656    
cufflinks 1.42475 0.0 4.76238   High
cufflinks 0.308418 0.0 1.19356 Low  
cufflinks 0.0116967 0.0 0.0625644 Low Low
cufflinks 0.0458219 0.0 0.21111 Low  

0 Strain