Gene : Phvul.005G160000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  1496
Name:  ? Phvul.005G160000 Secondary Identifier:  ? PAC:37153513
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G160000 0.5kb upstream 0.5kb upstream 6524 true Chr05: 38840181-38846704 Phaseolus vulgaris
Phvul.005G160000 0.5kb upstream 0.5kb upstream 500 false Chr05: 38846205-38846704 Phaseolus vulgaris
Phvul.005G160000 0.5kb downstream 0.5kb downstream 6524 true Chr05: 38839681-38846204 Phaseolus vulgaris
Phvul.005G160000 0.5kb downstream 0.5kb downstream 500 false Chr05: 38839681-38840180 Phaseolus vulgaris
Phvul.005G160000 1.0kb upstream 1.0kb upstream 7024 true Chr05: 38840181-38847204 Phaseolus vulgaris
Phvul.005G160000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38846205-38847204 Phaseolus vulgaris
Phvul.005G160000 1.0kb downstream 1.0kb downstream 7024 true Chr05: 38839181-38846204 Phaseolus vulgaris
Phvul.005G160000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38839181-38840180 Phaseolus vulgaris
Phvul.005G160000 2.0kb upstream 2.0kb upstream 8024 true Chr05: 38840181-38848204 Phaseolus vulgaris
Phvul.005G160000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38846205-38848204 Phaseolus vulgaris
Phvul.005G160000 2.0kb downstream 2.0kb downstream 8024 true Chr05: 38838181-38846204 Phaseolus vulgaris
Phvul.005G160000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38838181-38840180 Phaseolus vulgaris
Phvul.005G160000 5.0kb upstream 5.0kb upstream 11024 true Chr05: 38840181-38851204 Phaseolus vulgaris
Phvul.005G160000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38846205-38851204 Phaseolus vulgaris
Phvul.005G160000 5.0kb downstream 5.0kb downstream 11024 true Chr05: 38835181-38846204 Phaseolus vulgaris
Phvul.005G160000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38835181-38840180 Phaseolus vulgaris
Phvul.005G160000 10.0kb upstream 10.0kb upstream 16024 true Chr05: 38840181-38856204 Phaseolus vulgaris
Phvul.005G160000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38846205-38856204 Phaseolus vulgaris
Phvul.005G160000 10.0kb downstream 10.0kb downstream 16024 true Chr05: 38830181-38846204 Phaseolus vulgaris
Phvul.005G160000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38830181-38840180 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310260 5265 Fabidae View MSA
124074267 5270 Rosid View MSA
123753100 5271 Pentapetalae View MSA
122794326 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9258 0.0 5.74414   Low
cufflinks 5.0964 0.0 13.8213    
cufflinks 19.4727 0.0 50.6074   High
cufflinks 5.14592 0.0 14.0465    
cufflinks 9.41144 0.0 24.5729    
cufflinks 7.93234 0.0 20.8236    
cufflinks 10.8552 0.0 28.1674    
cufflinks 8.6297 0.0 22.5348    
cufflinks 10.4713 0.0 27.2155    
cufflinks 3.32474 0.0 9.36595   Low
cufflinks 9.92554 0.0 25.8643    

0 Strain