Gene : Phvul.005G160900 P. vulgaris v2.1
Defline:  (1 of 7) 3.1.3.75 - Phosphoethanolamine/phosphocholine phosphatase / PHOSPHO1 Genomic Order:  1505
Name:  ? Phvul.005G160900 Secondary Identifier:  ? PAC:37154280
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3385 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G160900 0.5kb upstream 0.5kb upstream 2909 true Chr05: 38912751-38915659 Phaseolus vulgaris
Phvul.005G160900 0.5kb upstream 0.5kb upstream 500 false Chr05: 38915160-38915659 Phaseolus vulgaris
Phvul.005G160900 0.5kb downstream 0.5kb downstream 2909 true Chr05: 38912251-38915159 Phaseolus vulgaris
Phvul.005G160900 0.5kb downstream 0.5kb downstream 500 false Chr05: 38912251-38912750 Phaseolus vulgaris
Phvul.005G160900 1.0kb upstream 1.0kb upstream 3409 true Chr05: 38912751-38916159 Phaseolus vulgaris
Phvul.005G160900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38915160-38916159 Phaseolus vulgaris
Phvul.005G160900 1.0kb downstream 1.0kb downstream 3409 true Chr05: 38911751-38915159 Phaseolus vulgaris
Phvul.005G160900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38911751-38912750 Phaseolus vulgaris
Phvul.005G160900 2.0kb upstream 2.0kb upstream 4409 true Chr05: 38912751-38917159 Phaseolus vulgaris
Phvul.005G160900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38915160-38917159 Phaseolus vulgaris
Phvul.005G160900 2.0kb downstream 2.0kb downstream 4409 true Chr05: 38910751-38915159 Phaseolus vulgaris
Phvul.005G160900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38910751-38912750 Phaseolus vulgaris
Phvul.005G160900 5.0kb upstream 5.0kb upstream 7409 true Chr05: 38912751-38920159 Phaseolus vulgaris
Phvul.005G160900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38915160-38920159 Phaseolus vulgaris
Phvul.005G160900 5.0kb downstream 5.0kb downstream 7409 true Chr05: 38907751-38915159 Phaseolus vulgaris
Phvul.005G160900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38907751-38912750 Phaseolus vulgaris
Phvul.005G160900 10.0kb upstream 10.0kb upstream 12409 true Chr05: 38912751-38925159 Phaseolus vulgaris
Phvul.005G160900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38915160-38925159 Phaseolus vulgaris
Phvul.005G160900 10.0kb downstream 10.0kb downstream 12409 true Chr05: 38902751-38915159 Phaseolus vulgaris
Phvul.005G160900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38902751-38912750 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617641 5273 Angiosperm View MSA
122253747 5265 Fabidae View MSA
123996217 5270 Rosid View MSA
123570733 5271 Pentapetalae View MSA
122605468 5272 Eudicot View MSA
120889787 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09529 0.0 4.08218    
cufflinks 0.0927035 0.0 0.429755 Low Low
cufflinks 0.0819769 0.0 0.38289 Low Low
cufflinks 6.47392 0.0 20.2659   High
cufflinks 0.261277 0.0 1.10192 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.167739 0.0 0.733793 Low  
cufflinks 0.392885 0.0 1.58774 Low  
cufflinks 0.990133 0.0 3.74526    
cufflinks 0.629113 0.0 2.46259    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain