Gene : Phvul.010G017700 P. vulgaris v2.1
Defline:  (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  167
Name:  ? Phvul.010G017700 Secondary Identifier:  ? PAC:37143518
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5046 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G017700 0.5kb upstream 0.5kb upstream 7548 true Chr10: 2607375-2614922 Phaseolus vulgaris
Phvul.010G017700 0.5kb upstream 0.5kb upstream 500 false Chr10: 2614423-2614922 Phaseolus vulgaris
Phvul.010G017700 0.5kb downstream 0.5kb downstream 7548 true Chr10: 2606875-2614422 Phaseolus vulgaris
Phvul.010G017700 0.5kb downstream 0.5kb downstream 500 false Chr10: 2606875-2607374 Phaseolus vulgaris
Phvul.010G017700 1.0kb upstream 1.0kb upstream 8048 true Chr10: 2607375-2615422 Phaseolus vulgaris
Phvul.010G017700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2614423-2615422 Phaseolus vulgaris
Phvul.010G017700 1.0kb downstream 1.0kb downstream 8048 true Chr10: 2606375-2614422 Phaseolus vulgaris
Phvul.010G017700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2606375-2607374 Phaseolus vulgaris
Phvul.010G017700 2.0kb upstream 2.0kb upstream 9048 true Chr10: 2607375-2616422 Phaseolus vulgaris
Phvul.010G017700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2614423-2616422 Phaseolus vulgaris
Phvul.010G017700 2.0kb downstream 2.0kb downstream 9048 true Chr10: 2605375-2614422 Phaseolus vulgaris
Phvul.010G017700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2605375-2607374 Phaseolus vulgaris
Phvul.010G017700 5.0kb upstream 5.0kb upstream 12048 true Chr10: 2607375-2619422 Phaseolus vulgaris
Phvul.010G017700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2614423-2619422 Phaseolus vulgaris
Phvul.010G017700 5.0kb downstream 5.0kb downstream 12048 true Chr10: 2602375-2614422 Phaseolus vulgaris
Phvul.010G017700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2602375-2607374 Phaseolus vulgaris
Phvul.010G017700 10.0kb upstream 10.0kb upstream 17048 true Chr10: 2607375-2624422 Phaseolus vulgaris
Phvul.010G017700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2614423-2624422 Phaseolus vulgaris
Phvul.010G017700 10.0kb downstream 10.0kb downstream 17048 true Chr10: 2597375-2614422 Phaseolus vulgaris
Phvul.010G017700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2597375-2607374 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309048 5265 Fabidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6389 0.0 66.3062   High
cufflinks 17.2474 0.0 45.1995    
cufflinks 13.3465 0.0 35.4184    
cufflinks 26.2342 0.0 67.9292   High
cufflinks 12.5198 0.0 33.5606    
cufflinks 12.2667 0.0 32.8371    
cufflinks 5.05218 0.0 14.678   Low
cufflinks 4.96074 0.0 14.3694   Low
cufflinks 12.4999 0.0 33.5635    
cufflinks 14.83 0.0 39.2156    
cufflinks 10.8695 0.0 29.5043    

0 Strain