Gene : Phvul.010G018600 P. vulgaris v2.1
Defline:  (1 of 13) PF04576 - Zein-binding (Zein-binding) Genomic Order:  176
Name:  ? Phvul.010G018600 Secondary Identifier:  ? PAC:37142115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G018600 0.5kb upstream 0.5kb upstream 4039 true Chr10: 2717617-2721655 Phaseolus vulgaris
Phvul.010G018600 0.5kb upstream 0.5kb upstream 500 false Chr10: 2717617-2718116 Phaseolus vulgaris
Phvul.010G018600 0.5kb downstream 0.5kb downstream 4039 true Chr10: 2718117-2722155 Phaseolus vulgaris
Phvul.010G018600 0.5kb downstream 0.5kb downstream 500 false Chr10: 2721656-2722155 Phaseolus vulgaris
Phvul.010G018600 1.0kb upstream 1.0kb upstream 4539 true Chr10: 2717117-2721655 Phaseolus vulgaris
Phvul.010G018600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2717117-2718116 Phaseolus vulgaris
Phvul.010G018600 1.0kb downstream 1.0kb downstream 4539 true Chr10: 2718117-2722655 Phaseolus vulgaris
Phvul.010G018600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2721656-2722655 Phaseolus vulgaris
Phvul.010G018600 2.0kb upstream 2.0kb upstream 5539 true Chr10: 2716117-2721655 Phaseolus vulgaris
Phvul.010G018600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2716117-2718116 Phaseolus vulgaris
Phvul.010G018600 2.0kb downstream 2.0kb downstream 5539 true Chr10: 2718117-2723655 Phaseolus vulgaris
Phvul.010G018600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2721656-2723655 Phaseolus vulgaris
Phvul.010G018600 5.0kb upstream 5.0kb upstream 8539 true Chr10: 2713117-2721655 Phaseolus vulgaris
Phvul.010G018600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2713117-2718116 Phaseolus vulgaris
Phvul.010G018600 5.0kb downstream 5.0kb downstream 8539 true Chr10: 2718117-2726655 Phaseolus vulgaris
Phvul.010G018600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2721656-2726655 Phaseolus vulgaris
Phvul.010G018600 10.0kb upstream 10.0kb upstream 13539 true Chr10: 2708117-2721655 Phaseolus vulgaris
Phvul.010G018600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2708117-2718116 Phaseolus vulgaris
Phvul.010G018600 10.0kb downstream 10.0kb downstream 13539 true Chr10: 2718117-2731655 Phaseolus vulgaris
Phvul.010G018600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2721656-2731655 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311064 5265 Fabidae View MSA
124068761 5270 Rosid View MSA
123746537 5271 Pentapetalae View MSA
122795309 5272 Eudicot View MSA
122048719 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0961 0.0 26.7675    
cufflinks 9.17088 0.0 24.4775    
cufflinks 8.23142 0.0 22.1078    
cufflinks 5.86351 0.0 16.4106   Low
cufflinks 9.82261 0.0 26.3128    
cufflinks 9.94047 0.0 26.351    
cufflinks 6.51805 0.0 17.8483   Low
cufflinks 6.82028 0.0 18.5236    
cufflinks 6.15041 0.0 16.9487   Low
cufflinks 12.1722 0.0 31.9443   High
cufflinks 9.04644 0.0 24.2828    

0 Strain