Gene : Phvul.010G016200 P. vulgaris v2.1
Defline:  (1 of 15) PF11961 - Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  152
Name:  ? Phvul.010G016200 Secondary Identifier:  ? PAC:37142760
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G016200 0.5kb upstream 0.5kb upstream 1877 true Chr10: 2387510-2389386 Phaseolus vulgaris
Phvul.010G016200 0.5kb upstream 0.5kb upstream 500 false Chr10: 2387510-2388009 Phaseolus vulgaris
Phvul.010G016200 0.5kb downstream 0.5kb downstream 1877 true Chr10: 2388010-2389886 Phaseolus vulgaris
Phvul.010G016200 0.5kb downstream 0.5kb downstream 500 false Chr10: 2389387-2389886 Phaseolus vulgaris
Phvul.010G016200 1.0kb upstream 1.0kb upstream 2377 true Chr10: 2387010-2389386 Phaseolus vulgaris
Phvul.010G016200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2387010-2388009 Phaseolus vulgaris
Phvul.010G016200 1.0kb downstream 1.0kb downstream 2377 true Chr10: 2388010-2390386 Phaseolus vulgaris
Phvul.010G016200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2389387-2390386 Phaseolus vulgaris
Phvul.010G016200 2.0kb upstream 2.0kb upstream 3377 true Chr10: 2386010-2389386 Phaseolus vulgaris
Phvul.010G016200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2386010-2388009 Phaseolus vulgaris
Phvul.010G016200 2.0kb downstream 2.0kb downstream 3377 true Chr10: 2388010-2391386 Phaseolus vulgaris
Phvul.010G016200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2389387-2391386 Phaseolus vulgaris
Phvul.010G016200 5.0kb upstream 5.0kb upstream 6377 true Chr10: 2383010-2389386 Phaseolus vulgaris
Phvul.010G016200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2383010-2388009 Phaseolus vulgaris
Phvul.010G016200 5.0kb downstream 5.0kb downstream 6377 true Chr10: 2388010-2394386 Phaseolus vulgaris
Phvul.010G016200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2389387-2394386 Phaseolus vulgaris
Phvul.010G016200 10.0kb upstream 10.0kb upstream 11377 true Chr10: 2378010-2389386 Phaseolus vulgaris
Phvul.010G016200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2378010-2388009 Phaseolus vulgaris
Phvul.010G016200 10.0kb downstream 10.0kb downstream 11377 true Chr10: 2388010-2399386 Phaseolus vulgaris
Phvul.010G016200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2389387-2399386 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296456 5265 Fabidae View MSA
124069721 5270 Rosid View MSA
123751095 5271 Pentapetalae View MSA
122796235 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.6268 0.0 71.5252   High
cufflinks 4.5108 0.0 12.9386    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.91711 0.0 3.1559    
cufflinks 4.20506 0.0 12.1842    
cufflinks 0.0668263 0.0 0.28835 Low Low
cufflinks 10.1512 0.0 26.9677    
cufflinks 8.09969 0.0 22.0178    
cufflinks 0.658481 0.0 2.32975    
cufflinks 7.74029 0.0 21.0937    
cufflinks 0.531707 0.0 1.92159 Low  

0 Strain