Gene : Phvul.010G016300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR26374:SF167 - TRANSCRIPTIONAL REGULATOR SUPERMAN Genomic Order:  153
Name:  ? Phvul.010G016300 Secondary Identifier:  ? PAC:37143690
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G016300 0.5kb upstream 0.5kb upstream 2083 true Chr10: 2403027-2405109 Phaseolus vulgaris
Phvul.010G016300 0.5kb upstream 0.5kb upstream 500 false Chr10: 2404610-2405109 Phaseolus vulgaris
Phvul.010G016300 0.5kb downstream 0.5kb downstream 2083 true Chr10: 2402527-2404609 Phaseolus vulgaris
Phvul.010G016300 0.5kb downstream 0.5kb downstream 500 false Chr10: 2402527-2403026 Phaseolus vulgaris
Phvul.010G016300 1.0kb upstream 1.0kb upstream 2583 true Chr10: 2403027-2405609 Phaseolus vulgaris
Phvul.010G016300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2404610-2405609 Phaseolus vulgaris
Phvul.010G016300 1.0kb downstream 1.0kb downstream 2583 true Chr10: 2402027-2404609 Phaseolus vulgaris
Phvul.010G016300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2402027-2403026 Phaseolus vulgaris
Phvul.010G016300 2.0kb upstream 2.0kb upstream 3583 true Chr10: 2403027-2406609 Phaseolus vulgaris
Phvul.010G016300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2404610-2406609 Phaseolus vulgaris
Phvul.010G016300 2.0kb downstream 2.0kb downstream 3583 true Chr10: 2401027-2404609 Phaseolus vulgaris
Phvul.010G016300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2401027-2403026 Phaseolus vulgaris
Phvul.010G016300 5.0kb upstream 5.0kb upstream 6583 true Chr10: 2403027-2409609 Phaseolus vulgaris
Phvul.010G016300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2404610-2409609 Phaseolus vulgaris
Phvul.010G016300 5.0kb downstream 5.0kb downstream 6583 true Chr10: 2398027-2404609 Phaseolus vulgaris
Phvul.010G016300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2398027-2403026 Phaseolus vulgaris
Phvul.010G016300 10.0kb upstream 10.0kb upstream 11583 true Chr10: 2403027-2414609 Phaseolus vulgaris
Phvul.010G016300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2404610-2414609 Phaseolus vulgaris
Phvul.010G016300 10.0kb downstream 10.0kb downstream 11583 true Chr10: 2393027-2404609 Phaseolus vulgaris
Phvul.010G016300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2393027-2403026 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307114 5265 Fabidae View MSA
124072849 5270 Rosid View MSA
123747736 5271 Pentapetalae View MSA
122788735 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0268524 0.0 0.133081 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.717863 0.0 2.65907    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.93303 0.0 17.3681    
cufflinks 5.89648 0.0 17.158    
cufflinks 6.82698 0.0 19.7342    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0282697 0.0 0.140247 Low Low

0 Strain