Gene : Phvul.005G165200 P. vulgaris v2.1
Defline:  (1 of 3) 3.4.24.64 - Mitochondrial processing peptidase / Processing enhancing peptidase Genomic Order:  1544
Name:  ? Phvul.005G165200 Secondary Identifier:  ? PAC:37152376
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3781 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G165200 0.5kb upstream 0.5kb upstream 4581 true Chr05: 39269639-39274219 Phaseolus vulgaris
Phvul.005G165200 0.5kb upstream 0.5kb upstream 500 false Chr05: 39269639-39270138 Phaseolus vulgaris
Phvul.005G165200 0.5kb downstream 0.5kb downstream 4581 true Chr05: 39270139-39274719 Phaseolus vulgaris
Phvul.005G165200 0.5kb downstream 0.5kb downstream 500 false Chr05: 39274220-39274719 Phaseolus vulgaris
Phvul.005G165200 1.0kb upstream 1.0kb upstream 5081 true Chr05: 39269139-39274219 Phaseolus vulgaris
Phvul.005G165200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39269139-39270138 Phaseolus vulgaris
Phvul.005G165200 1.0kb downstream 1.0kb downstream 5081 true Chr05: 39270139-39275219 Phaseolus vulgaris
Phvul.005G165200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39274220-39275219 Phaseolus vulgaris
Phvul.005G165200 2.0kb upstream 2.0kb upstream 6081 true Chr05: 39268139-39274219 Phaseolus vulgaris
Phvul.005G165200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39268139-39270138 Phaseolus vulgaris
Phvul.005G165200 2.0kb downstream 2.0kb downstream 6081 true Chr05: 39270139-39276219 Phaseolus vulgaris
Phvul.005G165200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39274220-39276219 Phaseolus vulgaris
Phvul.005G165200 5.0kb upstream 5.0kb upstream 9081 true Chr05: 39265139-39274219 Phaseolus vulgaris
Phvul.005G165200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39265139-39270138 Phaseolus vulgaris
Phvul.005G165200 5.0kb downstream 5.0kb downstream 9081 true Chr05: 39270139-39279219 Phaseolus vulgaris
Phvul.005G165200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39274220-39279219 Phaseolus vulgaris
Phvul.005G165200 10.0kb upstream 10.0kb upstream 14081 true Chr05: 39260139-39274219 Phaseolus vulgaris
Phvul.005G165200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39260139-39270138 Phaseolus vulgaris
Phvul.005G165200 10.0kb downstream 10.0kb downstream 14081 true Chr05: 39270139-39284219 Phaseolus vulgaris
Phvul.005G165200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39274220-39284219 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617768 5273 Angiosperm View MSA
122254086 5265 Fabidae View MSA
123996408 5270 Rosid View MSA
123570884 5271 Pentapetalae View MSA
122605617 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.508871 0.0 1.85348    
cufflinks 1.12804 0.0 3.77992    
cufflinks 0.589957 0.0 2.12037    
cufflinks 1.03019 0.0 3.50631    
cufflinks 3.0602 0.0 9.2244   High
cufflinks 0.454963 0.0 1.67264 Low Low
cufflinks 0.769085 0.0 2.68309    
cufflinks 2.5278 0.0 7.69407   High
cufflinks 0.480616 0.0 1.75682 Low Low
cufflinks 0.757038 0.0 2.66083    
cufflinks 2.4792 0.0 7.62669   High

0 Strain