Gene : Phvul.010G003300 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  32
Name:  ? Phvul.010G003300 Secondary Identifier:  ? PAC:37142891
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G003300 0.5kb upstream 0.5kb upstream 1871 true Chr10: 556021-557891 Phaseolus vulgaris
Phvul.010G003300 0.5kb upstream 0.5kb upstream 500 false Chr10: 557392-557891 Phaseolus vulgaris
Phvul.010G003300 0.5kb downstream 0.5kb downstream 1871 true Chr10: 555521-557391 Phaseolus vulgaris
Phvul.010G003300 0.5kb downstream 0.5kb downstream 500 false Chr10: 555521-556020 Phaseolus vulgaris
Phvul.010G003300 1.0kb upstream 1.0kb upstream 2371 true Chr10: 556021-558391 Phaseolus vulgaris
Phvul.010G003300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 557392-558391 Phaseolus vulgaris
Phvul.010G003300 1.0kb downstream 1.0kb downstream 2371 true Chr10: 555021-557391 Phaseolus vulgaris
Phvul.010G003300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 555021-556020 Phaseolus vulgaris
Phvul.010G003300 2.0kb upstream 2.0kb upstream 3371 true Chr10: 556021-559391 Phaseolus vulgaris
Phvul.010G003300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 557392-559391 Phaseolus vulgaris
Phvul.010G003300 2.0kb downstream 2.0kb downstream 3371 true Chr10: 554021-557391 Phaseolus vulgaris
Phvul.010G003300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 554021-556020 Phaseolus vulgaris
Phvul.010G003300 5.0kb upstream 5.0kb upstream 6371 true Chr10: 556021-562391 Phaseolus vulgaris
Phvul.010G003300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 557392-562391 Phaseolus vulgaris
Phvul.010G003300 5.0kb downstream 5.0kb downstream 6371 true Chr10: 551021-557391 Phaseolus vulgaris
Phvul.010G003300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 551021-556020 Phaseolus vulgaris
Phvul.010G003300 10.0kb upstream 10.0kb upstream 11371 true Chr10: 556021-567391 Phaseolus vulgaris
Phvul.010G003300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 557392-567391 Phaseolus vulgaris
Phvul.010G003300 10.0kb downstream 10.0kb downstream 11371 true Chr10: 546021-557391 Phaseolus vulgaris
Phvul.010G003300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 546021-556020 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316071 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.98957 0.0 6.38523    
cufflinks 1.47676 0.0 4.89606    
cufflinks 0.315419 0.0 1.21297 Low Low
cufflinks 0.878368 0.0 3.0982    
cufflinks 0.625168 0.0 2.27921 Low  
cufflinks 0.848633 0.0 2.9909    
cufflinks 16.9988 0.0 44.3736   High
cufflinks 8.09363 0.0 22.3414   High
cufflinks 4.65358 0.0 13.4875    
cufflinks 2.91668 0.0 8.98081    
cufflinks 1.31387 0.0 4.42377    

0 Strain