Gene : Phvul.010G003600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Genomic Order:  35
Name:  ? Phvul.010G003600 Secondary Identifier:  ? PAC:37143543
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G003600 0.5kb upstream 0.5kb upstream 7106 true Chr10: 611920-619025 Phaseolus vulgaris
Phvul.010G003600 0.5kb upstream 0.5kb upstream 500 false Chr10: 611920-612419 Phaseolus vulgaris
Phvul.010G003600 0.5kb downstream 0.5kb downstream 7106 true Chr10: 612420-619525 Phaseolus vulgaris
Phvul.010G003600 0.5kb downstream 0.5kb downstream 500 false Chr10: 619026-619525 Phaseolus vulgaris
Phvul.010G003600 1.0kb upstream 1.0kb upstream 7606 true Chr10: 611420-619025 Phaseolus vulgaris
Phvul.010G003600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 611420-612419 Phaseolus vulgaris
Phvul.010G003600 1.0kb downstream 1.0kb downstream 7606 true Chr10: 612420-620025 Phaseolus vulgaris
Phvul.010G003600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 619026-620025 Phaseolus vulgaris
Phvul.010G003600 2.0kb upstream 2.0kb upstream 8606 true Chr10: 610420-619025 Phaseolus vulgaris
Phvul.010G003600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 610420-612419 Phaseolus vulgaris
Phvul.010G003600 2.0kb downstream 2.0kb downstream 8606 true Chr10: 612420-621025 Phaseolus vulgaris
Phvul.010G003600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 619026-621025 Phaseolus vulgaris
Phvul.010G003600 5.0kb upstream 5.0kb upstream 11606 true Chr10: 607420-619025 Phaseolus vulgaris
Phvul.010G003600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 607420-612419 Phaseolus vulgaris
Phvul.010G003600 5.0kb downstream 5.0kb downstream 11606 true Chr10: 612420-624025 Phaseolus vulgaris
Phvul.010G003600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 619026-624025 Phaseolus vulgaris
Phvul.010G003600 10.0kb upstream 10.0kb upstream 16606 true Chr10: 602420-619025 Phaseolus vulgaris
Phvul.010G003600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 602420-612419 Phaseolus vulgaris
Phvul.010G003600 10.0kb downstream 10.0kb downstream 16606 true Chr10: 612420-629025 Phaseolus vulgaris
Phvul.010G003600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 619026-629025 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310331 5265 Fabidae View MSA
124074044 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7124 0.0 30.9554    
cufflinks 6.77736 0.0 18.6817   Low
cufflinks 52.4695 0.0 140.407 High High
cufflinks 29.5336 0.0 76.4855    
cufflinks 53.0276 0.0 141.516 High High
cufflinks 40.565 0.0 106.432 High  
cufflinks 14.2302 0.0 37.1551    
cufflinks 6.55759 0.0 18.0816   Low
cufflinks 22.2211 0.0 57.442    
cufflinks 28.0176 0.0 72.5328    
cufflinks 61.4877 0.0 165.912 High High

0 Strain