Gene : Phvul.010G001500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Genomic Order:  14
Name:  ? Phvul.010G001500 Secondary Identifier:  ? PAC:37143917
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G001500 0.5kb upstream 0.5kb upstream 4904 true Chr10: 411565-416468 Phaseolus vulgaris
Phvul.010G001500 0.5kb upstream 0.5kb upstream 500 false Chr10: 411565-412064 Phaseolus vulgaris
Phvul.010G001500 0.5kb downstream 0.5kb downstream 4904 true Chr10: 412065-416968 Phaseolus vulgaris
Phvul.010G001500 0.5kb downstream 0.5kb downstream 500 false Chr10: 416469-416968 Phaseolus vulgaris
Phvul.010G001500 1.0kb upstream 1.0kb upstream 5404 true Chr10: 411065-416468 Phaseolus vulgaris
Phvul.010G001500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 411065-412064 Phaseolus vulgaris
Phvul.010G001500 1.0kb downstream 1.0kb downstream 5404 true Chr10: 412065-417468 Phaseolus vulgaris
Phvul.010G001500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 416469-417468 Phaseolus vulgaris
Phvul.010G001500 2.0kb upstream 2.0kb upstream 6404 true Chr10: 410065-416468 Phaseolus vulgaris
Phvul.010G001500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 410065-412064 Phaseolus vulgaris
Phvul.010G001500 2.0kb downstream 2.0kb downstream 6404 true Chr10: 412065-418468 Phaseolus vulgaris
Phvul.010G001500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 416469-418468 Phaseolus vulgaris
Phvul.010G001500 5.0kb upstream 5.0kb upstream 9404 true Chr10: 407065-416468 Phaseolus vulgaris
Phvul.010G001500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 407065-412064 Phaseolus vulgaris
Phvul.010G001500 5.0kb downstream 5.0kb downstream 9404 true Chr10: 412065-421468 Phaseolus vulgaris
Phvul.010G001500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 416469-421468 Phaseolus vulgaris
Phvul.010G001500 10.0kb upstream 10.0kb upstream 14404 true Chr10: 402065-416468 Phaseolus vulgaris
Phvul.010G001500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 402065-412064 Phaseolus vulgaris
Phvul.010G001500 10.0kb downstream 10.0kb downstream 14404 true Chr10: 412065-426468 Phaseolus vulgaris
Phvul.010G001500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 416469-426468 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297107 5265 Fabidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.721638 0.0 3.17054    
cufflinks 1.17042 0.0 4.75158    
cufflinks 2.37591 0.0 10.1456   High
cufflinks 2.6739 0.0 8.90983   High
cufflinks 0.243507 0.0 0.959446 Low  
cufflinks 1.0333 0.0 4.3046    
cufflinks 0.0472663 0.0 0.224668 Low Low
cufflinks 0.0806199 0.0 0.348272 Low Low
cufflinks 0.155429 0.0 0.635508 Low  
cufflinks 0.321817 0.0 1.60295 Low  
cufflinks 0.086973 0.0 0.379323 Low Low

0 Strain