Gene : Phvul.005G154300 P. vulgaris v2.1
Defline:  (1 of 7) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  1439
Name:  ? Phvul.005G154300 Secondary Identifier:  ? PAC:37153976
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G154300 0.5kb upstream 0.5kb upstream 5210 true Chr05: 38382946-38388155 Phaseolus vulgaris
Phvul.005G154300 0.5kb upstream 0.5kb upstream 500 false Chr05: 38387656-38388155 Phaseolus vulgaris
Phvul.005G154300 0.5kb downstream 0.5kb downstream 5210 true Chr05: 38382446-38387655 Phaseolus vulgaris
Phvul.005G154300 0.5kb downstream 0.5kb downstream 500 false Chr05: 38382446-38382945 Phaseolus vulgaris
Phvul.005G154300 1.0kb upstream 1.0kb upstream 5710 true Chr05: 38382946-38388655 Phaseolus vulgaris
Phvul.005G154300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38387656-38388655 Phaseolus vulgaris
Phvul.005G154300 1.0kb downstream 1.0kb downstream 5710 true Chr05: 38381946-38387655 Phaseolus vulgaris
Phvul.005G154300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38381946-38382945 Phaseolus vulgaris
Phvul.005G154300 2.0kb upstream 2.0kb upstream 6710 true Chr05: 38382946-38389655 Phaseolus vulgaris
Phvul.005G154300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38387656-38389655 Phaseolus vulgaris
Phvul.005G154300 2.0kb downstream 2.0kb downstream 6710 true Chr05: 38380946-38387655 Phaseolus vulgaris
Phvul.005G154300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38380946-38382945 Phaseolus vulgaris
Phvul.005G154300 5.0kb upstream 5.0kb upstream 9710 true Chr05: 38382946-38392655 Phaseolus vulgaris
Phvul.005G154300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38387656-38392655 Phaseolus vulgaris
Phvul.005G154300 5.0kb downstream 5.0kb downstream 9710 true Chr05: 38377946-38387655 Phaseolus vulgaris
Phvul.005G154300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38377946-38382945 Phaseolus vulgaris
Phvul.005G154300 10.0kb upstream 10.0kb upstream 14710 true Chr05: 38382946-38397655 Phaseolus vulgaris
Phvul.005G154300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38387656-38397655 Phaseolus vulgaris
Phvul.005G154300 10.0kb downstream 10.0kb downstream 14710 true Chr05: 38372946-38387655 Phaseolus vulgaris
Phvul.005G154300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38372946-38382945 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311736 5265 Fabidae View MSA
124064084 5270 Rosid View MSA
123740426 5271 Pentapetalae View MSA
122786912 5272 Eudicot View MSA
122043285 5273 Angiosperm View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.74541 0.0 10.7164   Low
cufflinks 4.4435 0.0 15.6865    
cufflinks 7.93488 0.0 25.6337    
cufflinks 4.09758 0.0 14.919    
cufflinks 5.15592 0.0 17.8656    
cufflinks 9.02951 0.0 28.8039   High
cufflinks 8.032 0.0 25.7272    
cufflinks 4.70323 0.0 16.2302    
cufflinks 8.52287 0.0 27.237   High
cufflinks 3.69148 0.0 13.5748   Low
cufflinks 6.32734 0.0 21.0731    

0 Strain