Gene : Phvul.005G155500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Genomic Order:  1450
Name:  ? Phvul.005G155500 Secondary Identifier:  ? PAC:37153224
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G155500 0.5kb upstream 0.5kb upstream 6132 true Chr05: 38488250-38494381 Phaseolus vulgaris
Phvul.005G155500 0.5kb upstream 0.5kb upstream 500 false Chr05: 38488250-38488749 Phaseolus vulgaris
Phvul.005G155500 0.5kb downstream 0.5kb downstream 6132 true Chr05: 38488750-38494881 Phaseolus vulgaris
Phvul.005G155500 0.5kb downstream 0.5kb downstream 500 false Chr05: 38494382-38494881 Phaseolus vulgaris
Phvul.005G155500 1.0kb upstream 1.0kb upstream 6632 true Chr05: 38487750-38494381 Phaseolus vulgaris
Phvul.005G155500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38487750-38488749 Phaseolus vulgaris
Phvul.005G155500 1.0kb downstream 1.0kb downstream 6632 true Chr05: 38488750-38495381 Phaseolus vulgaris
Phvul.005G155500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38494382-38495381 Phaseolus vulgaris
Phvul.005G155500 2.0kb upstream 2.0kb upstream 7632 true Chr05: 38486750-38494381 Phaseolus vulgaris
Phvul.005G155500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38486750-38488749 Phaseolus vulgaris
Phvul.005G155500 2.0kb downstream 2.0kb downstream 7632 true Chr05: 38488750-38496381 Phaseolus vulgaris
Phvul.005G155500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38494382-38496381 Phaseolus vulgaris
Phvul.005G155500 5.0kb upstream 5.0kb upstream 10632 true Chr05: 38483750-38494381 Phaseolus vulgaris
Phvul.005G155500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38483750-38488749 Phaseolus vulgaris
Phvul.005G155500 5.0kb downstream 5.0kb downstream 10632 true Chr05: 38488750-38499381 Phaseolus vulgaris
Phvul.005G155500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38494382-38499381 Phaseolus vulgaris
Phvul.005G155500 10.0kb upstream 10.0kb upstream 15632 true Chr05: 38478750-38494381 Phaseolus vulgaris
Phvul.005G155500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38478750-38488749 Phaseolus vulgaris
Phvul.005G155500 10.0kb downstream 10.0kb downstream 15632 true Chr05: 38488750-38504381 Phaseolus vulgaris
Phvul.005G155500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38494382-38504381 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312495 5265 Fabidae View MSA
124067650 5270 Rosid View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.03098 0.0 19.4718    
cufflinks 7.37446 0.0 20.3276    
cufflinks 4.95165 0.0 14.1088   Low
cufflinks 8.81788 0.0 24.0122   High
cufflinks 5.84127 0.0 16.5646    
cufflinks 5.01463 0.0 14.3084   Low
cufflinks 6.45493 0.0 18.0008    
cufflinks 6.07422 0.0 16.9562    
cufflinks 6.29377 0.0 17.6144    
cufflinks 8.28981 0.0 22.6671   High
cufflinks 8.39909 0.0 22.9971   High

0 Strain