Gene : Phvul.005G156600 P. vulgaris v2.1
Defline:  (1 of 3) K17794 - mitochondrial import inner membrane translocase subunit TIM23 (TIM23) Genomic Order:  1461
Name:  ? Phvul.005G156600 Secondary Identifier:  ? PAC:37152592
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G156600 0.5kb upstream 0.5kb upstream 1479 true Chr05: 38547278-38548756 Phaseolus vulgaris
Phvul.005G156600 0.5kb upstream 0.5kb upstream 500 false Chr05: 38547278-38547777 Phaseolus vulgaris
Phvul.005G156600 0.5kb downstream 0.5kb downstream 1479 true Chr05: 38547778-38549256 Phaseolus vulgaris
Phvul.005G156600 0.5kb downstream 0.5kb downstream 500 false Chr05: 38548757-38549256 Phaseolus vulgaris
Phvul.005G156600 1.0kb upstream 1.0kb upstream 1979 true Chr05: 38546778-38548756 Phaseolus vulgaris
Phvul.005G156600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38546778-38547777 Phaseolus vulgaris
Phvul.005G156600 1.0kb downstream 1.0kb downstream 1979 true Chr05: 38547778-38549756 Phaseolus vulgaris
Phvul.005G156600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38548757-38549756 Phaseolus vulgaris
Phvul.005G156600 2.0kb upstream 2.0kb upstream 2979 true Chr05: 38545778-38548756 Phaseolus vulgaris
Phvul.005G156600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38545778-38547777 Phaseolus vulgaris
Phvul.005G156600 2.0kb downstream 2.0kb downstream 2979 true Chr05: 38547778-38550756 Phaseolus vulgaris
Phvul.005G156600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38548757-38550756 Phaseolus vulgaris
Phvul.005G156600 5.0kb upstream 5.0kb upstream 5979 true Chr05: 38542778-38548756 Phaseolus vulgaris
Phvul.005G156600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38542778-38547777 Phaseolus vulgaris
Phvul.005G156600 5.0kb downstream 5.0kb downstream 5979 true Chr05: 38547778-38553756 Phaseolus vulgaris
Phvul.005G156600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38548757-38553756 Phaseolus vulgaris
Phvul.005G156600 10.0kb upstream 10.0kb upstream 10979 true Chr05: 38537778-38548756 Phaseolus vulgaris
Phvul.005G156600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38537778-38547777 Phaseolus vulgaris
Phvul.005G156600 10.0kb downstream 10.0kb downstream 10979 true Chr05: 38547778-38558756 Phaseolus vulgaris
Phvul.005G156600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38548757-38558756 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314044 5265 Fabidae View MSA
124060899 5270 Rosid View MSA
123742035 5271 Pentapetalae View MSA
122795290 5272 Eudicot View MSA
122045727 5273 Angiosperm View MSA
121349022 5274 Embryophyte View MSA
123425450 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.7476 0.0 110.494 High  
cufflinks 39.5503 0.0 102.294 High  
cufflinks 26.3888 0.0 69.5677    
cufflinks 87.1257 0.0 232.492 High High
cufflinks 29.7142 0.0 77.0995    
cufflinks 18.5881 0.0 49.8993   Low
cufflinks 20.716 0.0 54.6725   Low
cufflinks 34.7579 0.0 90.1781 High  
cufflinks 29.834 0.0 77.4585    
cufflinks 26.504 0.0 69.1331    
cufflinks 33.3492 0.0 86.2978    

0 Strain