Gene : Phvul.010G009400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11654:SF79 - PROTEIN NRT1/ PTR FAMILY 5.5-RELATED Genomic Order:  89
Name:  ? Phvul.010G009400 Secondary Identifier:  ? PAC:37142221
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G009400 0.5kb upstream 0.5kb upstream 7385 true Chr10: 1360234-1367618 Phaseolus vulgaris
Phvul.010G009400 0.5kb upstream 0.5kb upstream 500 false Chr10: 1360234-1360733 Phaseolus vulgaris
Phvul.010G009400 0.5kb downstream 0.5kb downstream 7385 true Chr10: 1360734-1368118 Phaseolus vulgaris
Phvul.010G009400 0.5kb downstream 0.5kb downstream 500 false Chr10: 1367619-1368118 Phaseolus vulgaris
Phvul.010G009400 1.0kb upstream 1.0kb upstream 7885 true Chr10: 1359734-1367618 Phaseolus vulgaris
Phvul.010G009400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1359734-1360733 Phaseolus vulgaris
Phvul.010G009400 1.0kb downstream 1.0kb downstream 7885 true Chr10: 1360734-1368618 Phaseolus vulgaris
Phvul.010G009400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1367619-1368618 Phaseolus vulgaris
Phvul.010G009400 2.0kb upstream 2.0kb upstream 8885 true Chr10: 1358734-1367618 Phaseolus vulgaris
Phvul.010G009400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1358734-1360733 Phaseolus vulgaris
Phvul.010G009400 2.0kb downstream 2.0kb downstream 8885 true Chr10: 1360734-1369618 Phaseolus vulgaris
Phvul.010G009400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1367619-1369618 Phaseolus vulgaris
Phvul.010G009400 5.0kb upstream 5.0kb upstream 11885 true Chr10: 1355734-1367618 Phaseolus vulgaris
Phvul.010G009400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1355734-1360733 Phaseolus vulgaris
Phvul.010G009400 5.0kb downstream 5.0kb downstream 11885 true Chr10: 1360734-1372618 Phaseolus vulgaris
Phvul.010G009400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1367619-1372618 Phaseolus vulgaris
Phvul.010G009400 10.0kb upstream 10.0kb upstream 16885 true Chr10: 1350734-1367618 Phaseolus vulgaris
Phvul.010G009400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1350734-1360733 Phaseolus vulgaris
Phvul.010G009400 10.0kb downstream 10.0kb downstream 16885 true Chr10: 1360734-1377618 Phaseolus vulgaris
Phvul.010G009400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1367619-1377618 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309877 5265 Fabidae View MSA
124072261 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0924 0.0 42.2631   High
cufflinks 3.21972 0.0 12.8203    
cufflinks 4.68772 0.0 16.6126    
cufflinks 4.12995 0.0 15.5288    
cufflinks 8.8186 0.0 27.4523    
cufflinks 0.638861 0.0 3.83468   Low
cufflinks 6.65835 0.0 21.5943    
cufflinks 5.34236 0.0 19.3322    
cufflinks 2.29121 0.0 9.72317    
cufflinks 2.65797 0.0 10.7915    
cufflinks 15.4646 0.0 52.435   High

0 Strain