Gene : Phvul.010G008200 P. vulgaris v2.1
Defline:  (1 of 2) K13917 - mRNA-capping enzyme (RNGTT) Genomic Order:  77
Name:  ? Phvul.010G008200 Secondary Identifier:  ? PAC:37143934
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G008200 0.5kb upstream 0.5kb upstream 19093 true Chr10: 1145442-1164534 Phaseolus vulgaris
Phvul.010G008200 0.5kb upstream 0.5kb upstream 500 false Chr10: 1145442-1145941 Phaseolus vulgaris
Phvul.010G008200 0.5kb downstream 0.5kb downstream 19093 true Chr10: 1145942-1165034 Phaseolus vulgaris
Phvul.010G008200 0.5kb downstream 0.5kb downstream 500 false Chr10: 1164535-1165034 Phaseolus vulgaris
Phvul.010G008200 1.0kb upstream 1.0kb upstream 19593 true Chr10: 1144942-1164534 Phaseolus vulgaris
Phvul.010G008200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1144942-1145941 Phaseolus vulgaris
Phvul.010G008200 1.0kb downstream 1.0kb downstream 19593 true Chr10: 1145942-1165534 Phaseolus vulgaris
Phvul.010G008200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1164535-1165534 Phaseolus vulgaris
Phvul.010G008200 2.0kb upstream 2.0kb upstream 20593 true Chr10: 1143942-1164534 Phaseolus vulgaris
Phvul.010G008200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1143942-1145941 Phaseolus vulgaris
Phvul.010G008200 2.0kb downstream 2.0kb downstream 20593 true Chr10: 1145942-1166534 Phaseolus vulgaris
Phvul.010G008200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1164535-1166534 Phaseolus vulgaris
Phvul.010G008200 5.0kb upstream 5.0kb upstream 23593 true Chr10: 1140942-1164534 Phaseolus vulgaris
Phvul.010G008200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1140942-1145941 Phaseolus vulgaris
Phvul.010G008200 5.0kb downstream 5.0kb downstream 23593 true Chr10: 1145942-1169534 Phaseolus vulgaris
Phvul.010G008200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1164535-1169534 Phaseolus vulgaris
Phvul.010G008200 10.0kb upstream 10.0kb upstream 28593 true Chr10: 1135942-1164534 Phaseolus vulgaris
Phvul.010G008200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1135942-1145941 Phaseolus vulgaris
Phvul.010G008200 10.0kb downstream 10.0kb downstream 28593 true Chr10: 1145942-1174534 Phaseolus vulgaris
Phvul.010G008200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1164535-1174534 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304487 5265 Fabidae View MSA
124065683 5270 Rosid View MSA
123738577 5271 Pentapetalae View MSA
122791421 5272 Eudicot View MSA
122046582 5273 Angiosperm View MSA
121350766 5274 Embryophyte View MSA
123427499 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.85544 0.0 33.5748   Low
cufflinks 15.9486 0.0 46.0971    
cufflinks 24.1026 0.0 78.9041   High
cufflinks 8.22023 0.0 25.0848   Low
cufflinks 15.8986 0.0 50.6375    
cufflinks 19.5159 0.0 62.6429    
cufflinks 21.0818 0.0 67.9041    
cufflinks 18.2322 0.0 58.4323    
cufflinks 19.7954 0.0 63.536    
cufflinks 21.7301 0.0 69.9416    
cufflinks 14.6605 0.0 46.6388    

0 Strain