Gene : Phvul.010G011800 P. vulgaris v2.1
Defline:  (1 of 18) KOG0752 - Mitochondrial solute carrier protein Genomic Order:  101
Name:  ? Phvul.010G011800 Secondary Identifier:  ? PAC:37142697
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G011800 0.5kb upstream 0.5kb upstream 3948 true Chr10: 1537472-1541419 Phaseolus vulgaris
Phvul.010G011800 0.5kb upstream 0.5kb upstream 500 false Chr10: 1537472-1537971 Phaseolus vulgaris
Phvul.010G011800 0.5kb downstream 0.5kb downstream 3948 true Chr10: 1537972-1541919 Phaseolus vulgaris
Phvul.010G011800 0.5kb downstream 0.5kb downstream 500 false Chr10: 1541420-1541919 Phaseolus vulgaris
Phvul.010G011800 1.0kb upstream 1.0kb upstream 4448 true Chr10: 1536972-1541419 Phaseolus vulgaris
Phvul.010G011800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1536972-1537971 Phaseolus vulgaris
Phvul.010G011800 1.0kb downstream 1.0kb downstream 4448 true Chr10: 1537972-1542419 Phaseolus vulgaris
Phvul.010G011800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1541420-1542419 Phaseolus vulgaris
Phvul.010G011800 2.0kb upstream 2.0kb upstream 5448 true Chr10: 1535972-1541419 Phaseolus vulgaris
Phvul.010G011800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1535972-1537971 Phaseolus vulgaris
Phvul.010G011800 2.0kb downstream 2.0kb downstream 5448 true Chr10: 1537972-1543419 Phaseolus vulgaris
Phvul.010G011800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1541420-1543419 Phaseolus vulgaris
Phvul.010G011800 5.0kb upstream 5.0kb upstream 8448 true Chr10: 1532972-1541419 Phaseolus vulgaris
Phvul.010G011800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1532972-1537971 Phaseolus vulgaris
Phvul.010G011800 5.0kb downstream 5.0kb downstream 8448 true Chr10: 1537972-1546419 Phaseolus vulgaris
Phvul.010G011800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1541420-1546419 Phaseolus vulgaris
Phvul.010G011800 10.0kb upstream 10.0kb upstream 13448 true Chr10: 1527972-1541419 Phaseolus vulgaris
Phvul.010G011800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1527972-1537971 Phaseolus vulgaris
Phvul.010G011800 10.0kb downstream 10.0kb downstream 13448 true Chr10: 1537972-1551419 Phaseolus vulgaris
Phvul.010G011800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1541420-1551419 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310362 5265 Fabidae View MSA
124069911 5270 Rosid View MSA
123736580 5271 Pentapetalae View MSA
122788448 5272 Eudicot View MSA
122045339 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121344279 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7516 0.0 43.9835    
cufflinks 18.7723 0.0 49.0062   High
cufflinks 15.0164 0.0 39.7309    
cufflinks 18.9609 0.0 49.5084   High
cufflinks 12.3563 0.0 33.115    
cufflinks 8.94875 0.0 24.6513   Low
cufflinks 10.9116 0.0 29.4567    
cufflinks 14.9462 0.0 39.4585    
cufflinks 9.88849 0.0 26.9367   Low
cufflinks 19.5366 0.0 50.9443   High
cufflinks 11.3282 0.0 30.5501    

0 Strain