Gene : Phvul.010G013500 P. vulgaris v2.1
Defline:  (1 of 41) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  127
Name:  ? Phvul.010G013500 Secondary Identifier:  ? PAC:37142918
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G013500 0.5kb upstream 0.5kb upstream 2196 true Chr10: 1930904-1933099 Phaseolus vulgaris
Phvul.010G013500 0.5kb upstream 0.5kb upstream 500 false Chr10: 1930904-1931403 Phaseolus vulgaris
Phvul.010G013500 0.5kb downstream 0.5kb downstream 2196 true Chr10: 1931404-1933599 Phaseolus vulgaris
Phvul.010G013500 0.5kb downstream 0.5kb downstream 500 false Chr10: 1933100-1933599 Phaseolus vulgaris
Phvul.010G013500 1.0kb upstream 1.0kb upstream 2696 true Chr10: 1930404-1933099 Phaseolus vulgaris
Phvul.010G013500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1930404-1931403 Phaseolus vulgaris
Phvul.010G013500 1.0kb downstream 1.0kb downstream 2696 true Chr10: 1931404-1934099 Phaseolus vulgaris
Phvul.010G013500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1933100-1934099 Phaseolus vulgaris
Phvul.010G013500 2.0kb upstream 2.0kb upstream 3696 true Chr10: 1929404-1933099 Phaseolus vulgaris
Phvul.010G013500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1929404-1931403 Phaseolus vulgaris
Phvul.010G013500 2.0kb downstream 2.0kb downstream 3696 true Chr10: 1931404-1935099 Phaseolus vulgaris
Phvul.010G013500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1933100-1935099 Phaseolus vulgaris
Phvul.010G013500 5.0kb upstream 5.0kb upstream 6696 true Chr10: 1926404-1933099 Phaseolus vulgaris
Phvul.010G013500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1926404-1931403 Phaseolus vulgaris
Phvul.010G013500 5.0kb downstream 5.0kb downstream 6696 true Chr10: 1931404-1938099 Phaseolus vulgaris
Phvul.010G013500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1933100-1938099 Phaseolus vulgaris
Phvul.010G013500 10.0kb upstream 10.0kb upstream 11696 true Chr10: 1921404-1933099 Phaseolus vulgaris
Phvul.010G013500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1921404-1931403 Phaseolus vulgaris
Phvul.010G013500 10.0kb downstream 10.0kb downstream 11696 true Chr10: 1931404-1943099 Phaseolus vulgaris
Phvul.010G013500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1933100-1943099 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312837 5265 Fabidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.124033 0.0 0.522622 Low  
cufflinks 0.175809 0.0 0.716326 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0848723 0.0 0.368045 Low Low
cufflinks 0.961603 0.0 3.39886   High
cufflinks 0.48386 0.0 1.82014 Low  
cufflinks 0.318842 0.0 1.23348 Low  
cufflinks 0.213973 0.0 0.858244 Low  
cufflinks 0.210945 0.0 0.842491 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.77009 0.0 2.77545   High

0 Strain