Gene : Phvul.010G011200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR12725:SF72 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Genomic Order:  107
Name:  ? Phvul.010G011200 Secondary Identifier:  ? PAC:37142122
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7204 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G011200 0.5kb upstream 0.5kb upstream 3141 true Chr10: 1640396-1643536 Phaseolus vulgaris
Phvul.010G011200 0.5kb upstream 0.5kb upstream 500 false Chr10: 1640396-1640895 Phaseolus vulgaris
Phvul.010G011200 0.5kb downstream 0.5kb downstream 3141 true Chr10: 1640896-1644036 Phaseolus vulgaris
Phvul.010G011200 0.5kb downstream 0.5kb downstream 500 false Chr10: 1643537-1644036 Phaseolus vulgaris
Phvul.010G011200 1.0kb upstream 1.0kb upstream 3641 true Chr10: 1639896-1643536 Phaseolus vulgaris
Phvul.010G011200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1639896-1640895 Phaseolus vulgaris
Phvul.010G011200 1.0kb downstream 1.0kb downstream 3641 true Chr10: 1640896-1644536 Phaseolus vulgaris
Phvul.010G011200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1643537-1644536 Phaseolus vulgaris
Phvul.010G011200 2.0kb upstream 2.0kb upstream 4641 true Chr10: 1638896-1643536 Phaseolus vulgaris
Phvul.010G011200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1638896-1640895 Phaseolus vulgaris
Phvul.010G011200 2.0kb downstream 2.0kb downstream 4641 true Chr10: 1640896-1645536 Phaseolus vulgaris
Phvul.010G011200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1643537-1645536 Phaseolus vulgaris
Phvul.010G011200 5.0kb upstream 5.0kb upstream 7641 true Chr10: 1635896-1643536 Phaseolus vulgaris
Phvul.010G011200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1635896-1640895 Phaseolus vulgaris
Phvul.010G011200 5.0kb downstream 5.0kb downstream 7641 true Chr10: 1640896-1648536 Phaseolus vulgaris
Phvul.010G011200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1643537-1648536 Phaseolus vulgaris
Phvul.010G011200 10.0kb upstream 10.0kb upstream 12641 true Chr10: 1630896-1643536 Phaseolus vulgaris
Phvul.010G011200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1630896-1640895 Phaseolus vulgaris
Phvul.010G011200 10.0kb downstream 10.0kb downstream 12641 true Chr10: 1640896-1653536 Phaseolus vulgaris
Phvul.010G011200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1643537-1653536 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618126 5273 Angiosperm View MSA
122255042 5265 Fabidae View MSA
123996935 5270 Rosid View MSA
123571315 5271 Pentapetalae View MSA
122606041 5272 Eudicot View MSA
120890242 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0527191 0.0 0.261276 Low  
cufflinks 0.0480933 0.0 0.240208 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.183836 0.0 0.805179 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0271487 0.0 0.145216 Low Low
cufflinks 0.109331 0.0 0.503707 Low  

0 Strain