Gene : Phvul.005G158700 P. vulgaris v2.1
Defline:  (1 of 1) K12309 - beta-galactosidase (GLB1, ELNR1) Genomic Order:  1483
Name:  ? Phvul.005G158700 Secondary Identifier:  ? PAC:37153550
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G158700 0.5kb upstream 0.5kb upstream 11711 true Chr05: 38722711-38734421 Phaseolus vulgaris
Phvul.005G158700 0.5kb upstream 0.5kb upstream 500 false Chr05: 38722711-38723210 Phaseolus vulgaris
Phvul.005G158700 0.5kb downstream 0.5kb downstream 11711 true Chr05: 38723211-38734921 Phaseolus vulgaris
Phvul.005G158700 0.5kb downstream 0.5kb downstream 500 false Chr05: 38734422-38734921 Phaseolus vulgaris
Phvul.005G158700 1.0kb upstream 1.0kb upstream 12211 true Chr05: 38722211-38734421 Phaseolus vulgaris
Phvul.005G158700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38722211-38723210 Phaseolus vulgaris
Phvul.005G158700 1.0kb downstream 1.0kb downstream 12211 true Chr05: 38723211-38735421 Phaseolus vulgaris
Phvul.005G158700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38734422-38735421 Phaseolus vulgaris
Phvul.005G158700 2.0kb upstream 2.0kb upstream 13211 true Chr05: 38721211-38734421 Phaseolus vulgaris
Phvul.005G158700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38721211-38723210 Phaseolus vulgaris
Phvul.005G158700 2.0kb downstream 2.0kb downstream 13211 true Chr05: 38723211-38736421 Phaseolus vulgaris
Phvul.005G158700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38734422-38736421 Phaseolus vulgaris
Phvul.005G158700 5.0kb upstream 5.0kb upstream 16211 true Chr05: 38718211-38734421 Phaseolus vulgaris
Phvul.005G158700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38718211-38723210 Phaseolus vulgaris
Phvul.005G158700 5.0kb downstream 5.0kb downstream 16211 true Chr05: 38723211-38739421 Phaseolus vulgaris
Phvul.005G158700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38734422-38739421 Phaseolus vulgaris
Phvul.005G158700 10.0kb upstream 10.0kb upstream 21211 true Chr05: 38713211-38734421 Phaseolus vulgaris
Phvul.005G158700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38713211-38723210 Phaseolus vulgaris
Phvul.005G158700 10.0kb downstream 10.0kb downstream 21211 true Chr05: 38723211-38744421 Phaseolus vulgaris
Phvul.005G158700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38734422-38744421 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300034 5265 Fabidae View MSA
124062395 5270 Rosid View MSA
123738318 5271 Pentapetalae View MSA
122790635 5272 Eudicot View MSA
122047626 5273 Angiosperm View MSA
121345456 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87031 0.0 6.08832   Low
cufflinks 2.76474 0.0 10.3512    
cufflinks 4.54441 0.0 14.8567    
cufflinks 4.37701 0.0 14.7948    
cufflinks 3.09802 0.0 11.7865    
cufflinks 4.59176 0.0 17.492    
cufflinks 4.2196 0.0 16.4635    
cufflinks 5.64028 0.0 20.3454    
cufflinks 5.66114 0.0 21.0734    
cufflinks 7.16504 0.0 25.0217   High
cufflinks 3.05194 0.0 13.2675    

0 Strain