Gene : Phvul.007G280700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23042:SF65 - TRANSCRIPTION FACTOR BHLH92 Genomic Order:  2668
Name:  ? Phvul.007G280700 Secondary Identifier:  ? PAC:37165266
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G280700 0.5kb upstream 0.5kb upstream 1656 true Chr07: 39996300-39997955 Phaseolus vulgaris
Phvul.007G280700 0.5kb upstream 0.5kb upstream 500 false Chr07: 39996300-39996799 Phaseolus vulgaris
Phvul.007G280700 0.5kb downstream 0.5kb downstream 1656 true Chr07: 39996800-39998455 Phaseolus vulgaris
Phvul.007G280700 0.5kb downstream 0.5kb downstream 500 false Chr07: 39997956-39998455 Phaseolus vulgaris
Phvul.007G280700 1.0kb upstream 1.0kb upstream 2156 true Chr07: 39995800-39997955 Phaseolus vulgaris
Phvul.007G280700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39995800-39996799 Phaseolus vulgaris
Phvul.007G280700 1.0kb downstream 1.0kb downstream 2156 true Chr07: 39996800-39998955 Phaseolus vulgaris
Phvul.007G280700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39997956-39998955 Phaseolus vulgaris
Phvul.007G280700 2.0kb upstream 2.0kb upstream 3156 true Chr07: 39994800-39997955 Phaseolus vulgaris
Phvul.007G280700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39994800-39996799 Phaseolus vulgaris
Phvul.007G280700 2.0kb downstream 2.0kb downstream 3156 true Chr07: 39996800-39999955 Phaseolus vulgaris
Phvul.007G280700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39997956-39999955 Phaseolus vulgaris
Phvul.007G280700 5.0kb upstream 5.0kb upstream 6156 true Chr07: 39991800-39997955 Phaseolus vulgaris
Phvul.007G280700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39991800-39996799 Phaseolus vulgaris
Phvul.007G280700 5.0kb downstream 5.0kb downstream 6156 true Chr07: 39996800-40002955 Phaseolus vulgaris
Phvul.007G280700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39997956-40002955 Phaseolus vulgaris
Phvul.007G280700 10.0kb upstream 10.0kb upstream 11156 true Chr07: 39986800-39997955 Phaseolus vulgaris
Phvul.007G280700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39986800-39996799 Phaseolus vulgaris
Phvul.007G280700 10.0kb downstream 10.0kb downstream 11156 true Chr07: 39996800-40007955 Phaseolus vulgaris
Phvul.007G280700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39997956-40007955 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122252299 5265 Fabidae Singleton cluster - no MSA
124064245 5270 Rosid View MSA
123737328 5271 Pentapetalae View MSA
122793301 5272 Eudicot View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0341024 0.0 0.169011 Low  
cufflinks 0.0325718 0.0 0.162684 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0700444 0.0 0.325366 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.044284 0.0 0.213516 Low  
cufflinks 0.818844 0.0 3.03569   High
cufflinks 0.272636 0.0 1.10179 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0578681 0.0 0.273397 Low  
cufflinks 0.0715499 0.0 0.329644 Low  

0 Strain