Gene : Phvul.L003037 P. vulgaris v2.1
Defline:  (1 of 1) K13128 - zinc finger CCHC domain-containing protein 8 (ZCCHC8) Genomic Order:  15
Name:  ? Phvul.L003037 Secondary Identifier:  ? PAC:37157527
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L003037 0.5kb upstream 0.5kb upstream 33370 true scaffold_13: 499984-533353 Phaseolus vulgaris
Phvul.L003037 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 532854-533353 Phaseolus vulgaris
Phvul.L003037 0.5kb downstream 0.5kb downstream 33370 true scaffold_13: 499484-532853 Phaseolus vulgaris
Phvul.L003037 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 499484-499983 Phaseolus vulgaris
Phvul.L003037 1.0kb upstream 1.0kb upstream 33870 true scaffold_13: 499984-533853 Phaseolus vulgaris
Phvul.L003037 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 532854-533853 Phaseolus vulgaris
Phvul.L003037 1.0kb downstream 1.0kb downstream 33870 true scaffold_13: 498984-532853 Phaseolus vulgaris
Phvul.L003037 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 498984-499983 Phaseolus vulgaris
Phvul.L003037 2.0kb upstream 2.0kb upstream 34870 true scaffold_13: 499984-534853 Phaseolus vulgaris
Phvul.L003037 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 532854-534853 Phaseolus vulgaris
Phvul.L003037 2.0kb downstream 2.0kb downstream 34870 true scaffold_13: 497984-532853 Phaseolus vulgaris
Phvul.L003037 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 497984-499983 Phaseolus vulgaris
Phvul.L003037 5.0kb upstream 5.0kb upstream 37870 true scaffold_13: 499984-537853 Phaseolus vulgaris
Phvul.L003037 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 532854-537853 Phaseolus vulgaris
Phvul.L003037 5.0kb downstream 5.0kb downstream 37870 true scaffold_13: 494984-532853 Phaseolus vulgaris
Phvul.L003037 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 494984-499983 Phaseolus vulgaris
Phvul.L003037 10.0kb upstream 10.0kb upstream 42870 true scaffold_13: 499984-542853 Phaseolus vulgaris
Phvul.L003037 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 532854-542853 Phaseolus vulgaris
Phvul.L003037 10.0kb downstream 10.0kb downstream 42870 true scaffold_13: 489984-532853 Phaseolus vulgaris
Phvul.L003037 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 489984-499983 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306367 5265 Fabidae View MSA
124060877 5270 Rosid View MSA
123753433 5271 Pentapetalae View MSA
122793769 5272 Eudicot View MSA
122044061 5273 Angiosperm View MSA
121350555 5274 Embryophyte View MSA
123424500 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.56912 0.0 38.4954    
cufflinks 11.663 0.0 52.2866   High
cufflinks 6.94782 0.0 31.9311   Low
cufflinks 7.37855 0.0 29.4486   Low
cufflinks 8.32381 0.0 39.8787    
cufflinks 9.36445 0.0 39.7959    
cufflinks 8.33056 0.0 37.5558    
cufflinks 8.54555 0.0 44.5374    
cufflinks 7.88619 0.0 36.6362    
cufflinks 13.01 0.0 62.4807   High
cufflinks 10.5157 0.0 49.7224    

0 Strain