Gene : Phvul.005G137200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31189:SF2 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  1391
Name:  ? Phvul.005G137200 Secondary Identifier:  ? PAC:37154282
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G137200 0.5kb upstream 0.5kb upstream 2911 true Chr05: 37936692-37939602 Phaseolus vulgaris
Phvul.005G137200 0.5kb upstream 0.5kb upstream 500 false Chr05: 37939103-37939602 Phaseolus vulgaris
Phvul.005G137200 0.5kb downstream 0.5kb downstream 2911 true Chr05: 37936192-37939102 Phaseolus vulgaris
Phvul.005G137200 0.5kb downstream 0.5kb downstream 500 false Chr05: 37936192-37936691 Phaseolus vulgaris
Phvul.005G137200 1.0kb upstream 1.0kb upstream 3411 true Chr05: 37936692-37940102 Phaseolus vulgaris
Phvul.005G137200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37939103-37940102 Phaseolus vulgaris
Phvul.005G137200 1.0kb downstream 1.0kb downstream 3411 true Chr05: 37935692-37939102 Phaseolus vulgaris
Phvul.005G137200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37935692-37936691 Phaseolus vulgaris
Phvul.005G137200 2.0kb upstream 2.0kb upstream 4411 true Chr05: 37936692-37941102 Phaseolus vulgaris
Phvul.005G137200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37939103-37941102 Phaseolus vulgaris
Phvul.005G137200 2.0kb downstream 2.0kb downstream 4411 true Chr05: 37934692-37939102 Phaseolus vulgaris
Phvul.005G137200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37934692-37936691 Phaseolus vulgaris
Phvul.005G137200 5.0kb upstream 5.0kb upstream 7411 true Chr05: 37936692-37944102 Phaseolus vulgaris
Phvul.005G137200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37939103-37944102 Phaseolus vulgaris
Phvul.005G137200 5.0kb downstream 5.0kb downstream 7411 true Chr05: 37931692-37939102 Phaseolus vulgaris
Phvul.005G137200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37931692-37936691 Phaseolus vulgaris
Phvul.005G137200 10.0kb upstream 10.0kb upstream 12411 true Chr05: 37936692-37949102 Phaseolus vulgaris
Phvul.005G137200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37939103-37949102 Phaseolus vulgaris
Phvul.005G137200 10.0kb downstream 10.0kb downstream 12411 true Chr05: 37926692-37939102 Phaseolus vulgaris
Phvul.005G137200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37926692-37936691 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313919 5265 Fabidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017356 0.0 0.0860165 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.32679 0.0 9.95332    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain