Gene : Phvul.L003137 P. vulgaris v2.1
Defline:  (1 of 3) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  16
Name:  ? Phvul.L003137 Secondary Identifier:  ? PAC:37157544
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L003137 0.5kb upstream 0.5kb upstream 11849 true scaffold_13: 545500-557348 Phaseolus vulgaris
Phvul.L003137 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 545500-545999 Phaseolus vulgaris
Phvul.L003137 0.5kb downstream 0.5kb downstream 11849 true scaffold_13: 546000-557848 Phaseolus vulgaris
Phvul.L003137 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 557349-557848 Phaseolus vulgaris
Phvul.L003137 1.0kb upstream 1.0kb upstream 12349 true scaffold_13: 545000-557348 Phaseolus vulgaris
Phvul.L003137 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 545000-545999 Phaseolus vulgaris
Phvul.L003137 1.0kb downstream 1.0kb downstream 12349 true scaffold_13: 546000-558348 Phaseolus vulgaris
Phvul.L003137 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 557349-558348 Phaseolus vulgaris
Phvul.L003137 2.0kb upstream 2.0kb upstream 13349 true scaffold_13: 544000-557348 Phaseolus vulgaris
Phvul.L003137 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 544000-545999 Phaseolus vulgaris
Phvul.L003137 2.0kb downstream 2.0kb downstream 13349 true scaffold_13: 546000-559348 Phaseolus vulgaris
Phvul.L003137 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 557349-559348 Phaseolus vulgaris
Phvul.L003137 5.0kb upstream 5.0kb upstream 16349 true scaffold_13: 541000-557348 Phaseolus vulgaris
Phvul.L003137 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 541000-545999 Phaseolus vulgaris
Phvul.L003137 5.0kb downstream 5.0kb downstream 16349 true scaffold_13: 546000-562348 Phaseolus vulgaris
Phvul.L003137 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 557349-562348 Phaseolus vulgaris
Phvul.L003137 10.0kb upstream 10.0kb upstream 21349 true scaffold_13: 536000-557348 Phaseolus vulgaris
Phvul.L003137 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 536000-545999 Phaseolus vulgaris
Phvul.L003137 10.0kb downstream 10.0kb downstream 21349 true scaffold_13: 546000-567348 Phaseolus vulgaris
Phvul.L003137 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 557349-567348 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302798 5265 Fabidae View MSA
124066515 5270 Rosid View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6486 0.0 29.122   High
cufflinks 5.14374 0.0 15.1019    
cufflinks 6.71131 0.0 19.111    
cufflinks 7.44749 0.0 21.2147    
cufflinks 4.53638 0.0 13.6284   Low
cufflinks 5.46399 0.0 15.9302    
cufflinks 6.71518 0.0 19.204    
cufflinks 5.29989 0.0 15.4712    
cufflinks 7.98047 0.0 22.4589    
cufflinks 7.32952 0.0 20.7624    
cufflinks 5.32029 0.0 15.6666    

0 Strain