Gene : Phvul.L004237 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31669:SF45 - PROTEIN FAR1-RELATED SEQUENCE 3 Genomic Order:  27
Name:  ? Phvul.L004237 Secondary Identifier:  ? PAC:37157538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L004237 0.5kb upstream 0.5kb upstream 11547 true scaffold_13: 893325-904871 Phaseolus vulgaris
Phvul.L004237 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 904372-904871 Phaseolus vulgaris
Phvul.L004237 0.5kb downstream 0.5kb downstream 11547 true scaffold_13: 892825-904371 Phaseolus vulgaris
Phvul.L004237 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 892825-893324 Phaseolus vulgaris
Phvul.L004237 1.0kb upstream 1.0kb upstream 12047 true scaffold_13: 893325-905371 Phaseolus vulgaris
Phvul.L004237 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 904372-905371 Phaseolus vulgaris
Phvul.L004237 1.0kb downstream 1.0kb downstream 12047 true scaffold_13: 892325-904371 Phaseolus vulgaris
Phvul.L004237 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 892325-893324 Phaseolus vulgaris
Phvul.L004237 2.0kb upstream 2.0kb upstream 13047 true scaffold_13: 893325-906371 Phaseolus vulgaris
Phvul.L004237 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 904372-906371 Phaseolus vulgaris
Phvul.L004237 2.0kb downstream 2.0kb downstream 13047 true scaffold_13: 891325-904371 Phaseolus vulgaris
Phvul.L004237 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 891325-893324 Phaseolus vulgaris
Phvul.L004237 5.0kb upstream 5.0kb upstream 16047 true scaffold_13: 893325-909371 Phaseolus vulgaris
Phvul.L004237 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 904372-909371 Phaseolus vulgaris
Phvul.L004237 5.0kb downstream 5.0kb downstream 16047 true scaffold_13: 888325-904371 Phaseolus vulgaris
Phvul.L004237 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 888325-893324 Phaseolus vulgaris
Phvul.L004237 10.0kb upstream 10.0kb upstream 21047 true scaffold_13: 893325-914371 Phaseolus vulgaris
Phvul.L004237 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 904372-914371 Phaseolus vulgaris
Phvul.L004237 10.0kb downstream 10.0kb downstream 21047 true scaffold_13: 883325-904371 Phaseolus vulgaris
Phvul.L004237 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 883325-893324 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305879 5265 Fabidae View MSA
124064259 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.46417 0.0 16.7418   Low
cufflinks 7.04107 0.0 23.5554    
cufflinks 9.71501 0.0 31.2632    
cufflinks 4.34827 0.0 14.2682   Low
cufflinks 5.579 0.0 17.6868    
cufflinks 9.85393 0.0 31.8055    
cufflinks 8.90003 0.0 26.2561    
cufflinks 7.97999 0.0 26.0824    
cufflinks 7.14315 0.0 23.8989    
cufflinks 11.4808 0.0 41.7454   High
cufflinks 5.86397 0.0 17.8348    

0 Strain