Gene : Phvul.005G150500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B Genomic Order:  1401
Name:  ? Phvul.005G150500 Secondary Identifier:  ? PAC:37153511
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G150500 0.5kb upstream 0.5kb upstream 7091 true Chr05: 38082506-38089596 Phaseolus vulgaris
Phvul.005G150500 0.5kb upstream 0.5kb upstream 500 false Chr05: 38089097-38089596 Phaseolus vulgaris
Phvul.005G150500 0.5kb downstream 0.5kb downstream 7091 true Chr05: 38082006-38089096 Phaseolus vulgaris
Phvul.005G150500 0.5kb downstream 0.5kb downstream 500 false Chr05: 38082006-38082505 Phaseolus vulgaris
Phvul.005G150500 1.0kb upstream 1.0kb upstream 7591 true Chr05: 38082506-38090096 Phaseolus vulgaris
Phvul.005G150500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38089097-38090096 Phaseolus vulgaris
Phvul.005G150500 1.0kb downstream 1.0kb downstream 7591 true Chr05: 38081506-38089096 Phaseolus vulgaris
Phvul.005G150500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38081506-38082505 Phaseolus vulgaris
Phvul.005G150500 2.0kb upstream 2.0kb upstream 8591 true Chr05: 38082506-38091096 Phaseolus vulgaris
Phvul.005G150500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38089097-38091096 Phaseolus vulgaris
Phvul.005G150500 2.0kb downstream 2.0kb downstream 8591 true Chr05: 38080506-38089096 Phaseolus vulgaris
Phvul.005G150500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38080506-38082505 Phaseolus vulgaris
Phvul.005G150500 5.0kb upstream 5.0kb upstream 11591 true Chr05: 38082506-38094096 Phaseolus vulgaris
Phvul.005G150500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38089097-38094096 Phaseolus vulgaris
Phvul.005G150500 5.0kb downstream 5.0kb downstream 11591 true Chr05: 38077506-38089096 Phaseolus vulgaris
Phvul.005G150500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38077506-38082505 Phaseolus vulgaris
Phvul.005G150500 10.0kb upstream 10.0kb upstream 16591 true Chr05: 38082506-38099096 Phaseolus vulgaris
Phvul.005G150500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38089097-38099096 Phaseolus vulgaris
Phvul.005G150500 10.0kb downstream 10.0kb downstream 16591 true Chr05: 38072506-38089096 Phaseolus vulgaris
Phvul.005G150500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38072506-38082505 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305411 5265 Fabidae View MSA
124062604 5270 Rosid View MSA
123736411 5271 Pentapetalae View MSA
122792021 5272 Eudicot View MSA
122045441 5273 Angiosperm View MSA
121347083 5274 Embryophyte View MSA
123424987 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.7376 0.0 7.94586   Low
cufflinks 5.20011 0.0 14.2474    
cufflinks 9.19559 0.0 24.1314   High
cufflinks 2.6716 0.0 7.86487   Low
cufflinks 5.35918 0.0 14.7311    
cufflinks 8.05697 0.0 21.3144    
cufflinks 8.67975 0.0 22.823    
cufflinks 9.43767 0.0 24.6533   High
cufflinks 6.98435 0.0 18.6519    
cufflinks 5.51645 0.0 15.0523    
cufflinks 4.85061 0.0 13.4258    

0 Strain