Gene : Phvul.010G000200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10032:SF215 - TRIHELIX TRANSCRIPTION FACTOR GT-3A-RELATED Genomic Order:  2
Name:  ? Phvul.010G000200 Secondary Identifier:  ? PAC:37142114
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G000200 0.5kb upstream 0.5kb upstream 2262 true Chr10: 41404-43665 Phaseolus vulgaris
Phvul.010G000200 0.5kb upstream 0.5kb upstream 500 false Chr10: 43166-43665 Phaseolus vulgaris
Phvul.010G000200 0.5kb downstream 0.5kb downstream 2262 true Chr10: 40904-43165 Phaseolus vulgaris
Phvul.010G000200 0.5kb downstream 0.5kb downstream 500 false Chr10: 40904-41403 Phaseolus vulgaris
Phvul.010G000200 1.0kb upstream 1.0kb upstream 2762 true Chr10: 41404-44165 Phaseolus vulgaris
Phvul.010G000200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43166-44165 Phaseolus vulgaris
Phvul.010G000200 1.0kb downstream 1.0kb downstream 2762 true Chr10: 40404-43165 Phaseolus vulgaris
Phvul.010G000200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40404-41403 Phaseolus vulgaris
Phvul.010G000200 2.0kb upstream 2.0kb upstream 3762 true Chr10: 41404-45165 Phaseolus vulgaris
Phvul.010G000200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43166-45165 Phaseolus vulgaris
Phvul.010G000200 2.0kb downstream 2.0kb downstream 3762 true Chr10: 39404-43165 Phaseolus vulgaris
Phvul.010G000200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39404-41403 Phaseolus vulgaris
Phvul.010G000200 5.0kb upstream 5.0kb upstream 6762 true Chr10: 41404-48165 Phaseolus vulgaris
Phvul.010G000200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43166-48165 Phaseolus vulgaris
Phvul.010G000200 5.0kb downstream 5.0kb downstream 6762 true Chr10: 36404-43165 Phaseolus vulgaris
Phvul.010G000200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36404-41403 Phaseolus vulgaris
Phvul.010G000200 10.0kb upstream 10.0kb upstream 11762 true Chr10: 41404-53165 Phaseolus vulgaris
Phvul.010G000200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43166-53165 Phaseolus vulgaris
Phvul.010G000200 10.0kb downstream 10.0kb downstream 11762 true Chr10: 31404-43165 Phaseolus vulgaris
Phvul.010G000200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 31404-41403 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255060 5265 Fabidae View MSA
123996946 5270 Rosid View MSA
123753444 5271 Pentapetalae View MSA
122785862 5272 Eudicot View MSA
122041695 5273 Angiosperm View MSA
121348900 5274 Embryophyte View MSA
123381067 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.99932 0.0 6.30984    
cufflinks 0.306135 0.0 1.16552 Low  
cufflinks 0.149863 0.0 0.603335 Low Low
cufflinks 0.218951 0.0 0.865431 Low Low
cufflinks 1.54345 0.0 5.07529    
cufflinks 0.261356 0.0 1.00606 Low Low
cufflinks 1.74081 0.0 5.52058    
cufflinks 3.44526 0.0 10.1345   High
cufflinks 0.940172 0.0 3.19814    
cufflinks 3.77965 0.0 11.1467   High
cufflinks 0.953183 0.0 3.27701    

0 Strain