Gene : Phvul.005G152000 P. vulgaris v2.1
Defline:  (1 of 3) K11968 - ariadne-1 (ARIH1) Genomic Order:  1416
Name:  ? Phvul.005G152000 Secondary Identifier:  ? PAC:37152303
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G152000 0.5kb upstream 0.5kb upstream 7933 true Chr05: 38231966-38239898 Phaseolus vulgaris
Phvul.005G152000 0.5kb upstream 0.5kb upstream 500 false Chr05: 38231966-38232465 Phaseolus vulgaris
Phvul.005G152000 0.5kb downstream 0.5kb downstream 7933 true Chr05: 38232466-38240398 Phaseolus vulgaris
Phvul.005G152000 0.5kb downstream 0.5kb downstream 500 false Chr05: 38239899-38240398 Phaseolus vulgaris
Phvul.005G152000 1.0kb upstream 1.0kb upstream 8433 true Chr05: 38231466-38239898 Phaseolus vulgaris
Phvul.005G152000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38231466-38232465 Phaseolus vulgaris
Phvul.005G152000 1.0kb downstream 1.0kb downstream 8433 true Chr05: 38232466-38240898 Phaseolus vulgaris
Phvul.005G152000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38239899-38240898 Phaseolus vulgaris
Phvul.005G152000 2.0kb upstream 2.0kb upstream 9433 true Chr05: 38230466-38239898 Phaseolus vulgaris
Phvul.005G152000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38230466-38232465 Phaseolus vulgaris
Phvul.005G152000 2.0kb downstream 2.0kb downstream 9433 true Chr05: 38232466-38241898 Phaseolus vulgaris
Phvul.005G152000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38239899-38241898 Phaseolus vulgaris
Phvul.005G152000 5.0kb upstream 5.0kb upstream 12433 true Chr05: 38227466-38239898 Phaseolus vulgaris
Phvul.005G152000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38227466-38232465 Phaseolus vulgaris
Phvul.005G152000 5.0kb downstream 5.0kb downstream 12433 true Chr05: 38232466-38244898 Phaseolus vulgaris
Phvul.005G152000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38239899-38244898 Phaseolus vulgaris
Phvul.005G152000 10.0kb upstream 10.0kb upstream 17433 true Chr05: 38222466-38239898 Phaseolus vulgaris
Phvul.005G152000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38222466-38232465 Phaseolus vulgaris
Phvul.005G152000 10.0kb downstream 10.0kb downstream 17433 true Chr05: 38232466-38249898 Phaseolus vulgaris
Phvul.005G152000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38239899-38249898 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314915 5265 Fabidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.2904 0.0 76.6267    
cufflinks 24.5214 0.0 63.7054    
cufflinks 19.9003 0.0 51.4689    
cufflinks 19.136 0.0 49.4651    
cufflinks 24.8656 0.0 64.5324    
cufflinks 18.4997 0.0 47.8251    
cufflinks 25.8711 0.0 67.3931    
cufflinks 18.1185 0.0 46.843    
cufflinks 28.0236 0.0 73.2041    
cufflinks 60.6836 0.0 167.81 High High
cufflinks 27.9884 0.0 72.9717    

0 Strain