Gene : Phvul.010G021200 P. vulgaris v2.1
Defline:  (1 of 3) K13456 - RPM1-interacting protein 4 (RIN4) Genomic Order:  204
Name:  ? Phvul.010G021200 Secondary Identifier:  ? PAC:37143389
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G021200 0.5kb upstream 0.5kb upstream 6631 true Chr10: 3035422-3042052 Phaseolus vulgaris
Phvul.010G021200 0.5kb upstream 0.5kb upstream 500 false Chr10: 3035422-3035921 Phaseolus vulgaris
Phvul.010G021200 0.5kb downstream 0.5kb downstream 6631 true Chr10: 3035922-3042552 Phaseolus vulgaris
Phvul.010G021200 0.5kb downstream 0.5kb downstream 500 false Chr10: 3042053-3042552 Phaseolus vulgaris
Phvul.010G021200 1.0kb upstream 1.0kb upstream 7131 true Chr10: 3034922-3042052 Phaseolus vulgaris
Phvul.010G021200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3034922-3035921 Phaseolus vulgaris
Phvul.010G021200 1.0kb downstream 1.0kb downstream 7131 true Chr10: 3035922-3043052 Phaseolus vulgaris
Phvul.010G021200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3042053-3043052 Phaseolus vulgaris
Phvul.010G021200 2.0kb upstream 2.0kb upstream 8131 true Chr10: 3033922-3042052 Phaseolus vulgaris
Phvul.010G021200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3033922-3035921 Phaseolus vulgaris
Phvul.010G021200 2.0kb downstream 2.0kb downstream 8131 true Chr10: 3035922-3044052 Phaseolus vulgaris
Phvul.010G021200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3042053-3044052 Phaseolus vulgaris
Phvul.010G021200 5.0kb upstream 5.0kb upstream 11131 true Chr10: 3030922-3042052 Phaseolus vulgaris
Phvul.010G021200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3030922-3035921 Phaseolus vulgaris
Phvul.010G021200 5.0kb downstream 5.0kb downstream 11131 true Chr10: 3035922-3047052 Phaseolus vulgaris
Phvul.010G021200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3042053-3047052 Phaseolus vulgaris
Phvul.010G021200 10.0kb upstream 10.0kb upstream 16131 true Chr10: 3025922-3042052 Phaseolus vulgaris
Phvul.010G021200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3025922-3035921 Phaseolus vulgaris
Phvul.010G021200 10.0kb downstream 10.0kb downstream 16131 true Chr10: 3035922-3052052 Phaseolus vulgaris
Phvul.010G021200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3042053-3052052 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2671 0.0 109.96    
cufflinks 17.136 0.0 57.1009   Low
cufflinks 43.546 0.0 143.537 High  
cufflinks 31.476 0.0 103.301    
cufflinks 31.1489 0.0 100.603    
cufflinks 32.5667 0.0 113.903    
cufflinks 45.3169 0.0 148.611 High  
cufflinks 29.145 0.0 93.0074 High  
cufflinks 59.5235 0.0 201.685 High High
cufflinks 30.4657 0.0 98.9898    
cufflinks 28.8816 0.0 92.225    

0 Strain