Gene : Phvul.005G152500 P. vulgaris v2.1
Defline:  (1 of 3) K10773 - endonuclease III (NTH) Genomic Order:  1421
Name:  ? Phvul.005G152500 Secondary Identifier:  ? PAC:37153433
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G152500 0.5kb upstream 0.5kb upstream 4596 true Chr05: 38266154-38270749 Phaseolus vulgaris
Phvul.005G152500 0.5kb upstream 0.5kb upstream 500 false Chr05: 38270250-38270749 Phaseolus vulgaris
Phvul.005G152500 0.5kb downstream 0.5kb downstream 4596 true Chr05: 38265654-38270249 Phaseolus vulgaris
Phvul.005G152500 0.5kb downstream 0.5kb downstream 500 false Chr05: 38265654-38266153 Phaseolus vulgaris
Phvul.005G152500 1.0kb upstream 1.0kb upstream 5096 true Chr05: 38266154-38271249 Phaseolus vulgaris
Phvul.005G152500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38270250-38271249 Phaseolus vulgaris
Phvul.005G152500 1.0kb downstream 1.0kb downstream 5096 true Chr05: 38265154-38270249 Phaseolus vulgaris
Phvul.005G152500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38265154-38266153 Phaseolus vulgaris
Phvul.005G152500 2.0kb upstream 2.0kb upstream 6096 true Chr05: 38266154-38272249 Phaseolus vulgaris
Phvul.005G152500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38270250-38272249 Phaseolus vulgaris
Phvul.005G152500 2.0kb downstream 2.0kb downstream 6096 true Chr05: 38264154-38270249 Phaseolus vulgaris
Phvul.005G152500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38264154-38266153 Phaseolus vulgaris
Phvul.005G152500 5.0kb upstream 5.0kb upstream 9096 true Chr05: 38266154-38275249 Phaseolus vulgaris
Phvul.005G152500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38270250-38275249 Phaseolus vulgaris
Phvul.005G152500 5.0kb downstream 5.0kb downstream 9096 true Chr05: 38261154-38270249 Phaseolus vulgaris
Phvul.005G152500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38261154-38266153 Phaseolus vulgaris
Phvul.005G152500 10.0kb upstream 10.0kb upstream 14096 true Chr05: 38266154-38280249 Phaseolus vulgaris
Phvul.005G152500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38270250-38280249 Phaseolus vulgaris
Phvul.005G152500 10.0kb downstream 10.0kb downstream 14096 true Chr05: 38256154-38270249 Phaseolus vulgaris
Phvul.005G152500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38256154-38266153 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041361 5273 Angiosperm View MSA
122296840 5265 Fabidae View MSA
124060814 5270 Rosid View MSA
123745543 5271 Pentapetalae View MSA
122791789 5272 Eudicot View MSA
121344873 5274 Embryophyte View MSA
123425670 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.52061 0.0 8.16178    
cufflinks 1.82913 0.0 7.11449    
cufflinks 4.67891 0.0 19.4726   High
cufflinks 1.79873 0.0 9.56899    
cufflinks 2.12733 0.0 11.0656    
cufflinks 3.69557 0.0 17.0142   High
cufflinks 0.728963 0.0 3.28544    
cufflinks 0.201793 0.0 0.825215 Low Low
cufflinks 0.295794 0.0 1.1711 Low Low
cufflinks 2.45811 0.0 8.6682    
cufflinks 1.36535 0.0 8.37445    

0 Strain