Gene : Phvul.010G022200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10585//PTHR10585:SF36 - ER LUMEN PROTEIN RETAINING RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  214
Name:  ? Phvul.010G022200 Secondary Identifier:  ? PAC:37144251
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G022200 0.5kb upstream 0.5kb upstream 7673 true Chr10: 3137656-3145328 Phaseolus vulgaris
Phvul.010G022200 0.5kb upstream 0.5kb upstream 500 false Chr10: 3144829-3145328 Phaseolus vulgaris
Phvul.010G022200 0.5kb downstream 0.5kb downstream 7673 true Chr10: 3137156-3144828 Phaseolus vulgaris
Phvul.010G022200 0.5kb downstream 0.5kb downstream 500 false Chr10: 3137156-3137655 Phaseolus vulgaris
Phvul.010G022200 1.0kb upstream 1.0kb upstream 8173 true Chr10: 3137656-3145828 Phaseolus vulgaris
Phvul.010G022200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3144829-3145828 Phaseolus vulgaris
Phvul.010G022200 1.0kb downstream 1.0kb downstream 8173 true Chr10: 3136656-3144828 Phaseolus vulgaris
Phvul.010G022200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3136656-3137655 Phaseolus vulgaris
Phvul.010G022200 2.0kb upstream 2.0kb upstream 9173 true Chr10: 3137656-3146828 Phaseolus vulgaris
Phvul.010G022200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3144829-3146828 Phaseolus vulgaris
Phvul.010G022200 2.0kb downstream 2.0kb downstream 9173 true Chr10: 3135656-3144828 Phaseolus vulgaris
Phvul.010G022200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3135656-3137655 Phaseolus vulgaris
Phvul.010G022200 5.0kb upstream 5.0kb upstream 12173 true Chr10: 3137656-3149828 Phaseolus vulgaris
Phvul.010G022200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3144829-3149828 Phaseolus vulgaris
Phvul.010G022200 5.0kb downstream 5.0kb downstream 12173 true Chr10: 3132656-3144828 Phaseolus vulgaris
Phvul.010G022200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3132656-3137655 Phaseolus vulgaris
Phvul.010G022200 10.0kb upstream 10.0kb upstream 17173 true Chr10: 3137656-3154828 Phaseolus vulgaris
Phvul.010G022200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3144829-3154828 Phaseolus vulgaris
Phvul.010G022200 10.0kb downstream 10.0kb downstream 17173 true Chr10: 3127656-3144828 Phaseolus vulgaris
Phvul.010G022200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3127656-3137655 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302012 5265 Fabidae View MSA
124064321 5270 Rosid View MSA
123752811 5271 Pentapetalae View MSA
122786359 5272 Eudicot View MSA
122047549 5273 Angiosperm View MSA
121310757 5274 Embryophyte View MSA
123348166 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17111 0.0 7.51991    
cufflinks 1.81632 0.0 6.42283    
cufflinks 1.41128 0.0 5.09648    
cufflinks 1.76857 0.0 6.29512    
cufflinks 1.00765 0.0 3.77752   Low
cufflinks 3.87854 0.0 12.6099   High
cufflinks 2.80309 0.0 9.51212    
cufflinks 6.27279 0.0 19.3302   High
cufflinks 1.90046 0.0 6.74407    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.97392 0.0 6.97038    

0 Strain