Gene : Phvul.007G270600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Genomic Order:  2565
Name:  ? Phvul.007G270600 Secondary Identifier:  ? PAC:37164458
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G270600 0.5kb upstream 0.5kb upstream 5131 true Chr07: 39182582-39187712 Phaseolus vulgaris
Phvul.007G270600 0.5kb upstream 0.5kb upstream 500 false Chr07: 39182582-39183081 Phaseolus vulgaris
Phvul.007G270600 0.5kb downstream 0.5kb downstream 5131 true Chr07: 39183082-39188212 Phaseolus vulgaris
Phvul.007G270600 0.5kb downstream 0.5kb downstream 500 false Chr07: 39187713-39188212 Phaseolus vulgaris
Phvul.007G270600 1.0kb upstream 1.0kb upstream 5631 true Chr07: 39182082-39187712 Phaseolus vulgaris
Phvul.007G270600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39182082-39183081 Phaseolus vulgaris
Phvul.007G270600 1.0kb downstream 1.0kb downstream 5631 true Chr07: 39183082-39188712 Phaseolus vulgaris
Phvul.007G270600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39187713-39188712 Phaseolus vulgaris
Phvul.007G270600 2.0kb upstream 2.0kb upstream 6631 true Chr07: 39181082-39187712 Phaseolus vulgaris
Phvul.007G270600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39181082-39183081 Phaseolus vulgaris
Phvul.007G270600 2.0kb downstream 2.0kb downstream 6631 true Chr07: 39183082-39189712 Phaseolus vulgaris
Phvul.007G270600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39187713-39189712 Phaseolus vulgaris
Phvul.007G270600 5.0kb upstream 5.0kb upstream 9631 true Chr07: 39178082-39187712 Phaseolus vulgaris
Phvul.007G270600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39178082-39183081 Phaseolus vulgaris
Phvul.007G270600 5.0kb downstream 5.0kb downstream 9631 true Chr07: 39183082-39192712 Phaseolus vulgaris
Phvul.007G270600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39187713-39192712 Phaseolus vulgaris
Phvul.007G270600 10.0kb upstream 10.0kb upstream 14631 true Chr07: 39173082-39187712 Phaseolus vulgaris
Phvul.007G270600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39173082-39183081 Phaseolus vulgaris
Phvul.007G270600 10.0kb downstream 10.0kb downstream 14631 true Chr07: 39183082-39197712 Phaseolus vulgaris
Phvul.007G270600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39187713-39197712 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314840 5265 Fabidae View MSA
124062517 5270 Rosid View MSA
123739151 5271 Pentapetalae View MSA
122796554 5272 Eudicot View MSA
122051532 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351338 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.0747 0.0 89.0576   High
cufflinks 5.58306 0.0 19.9961    
cufflinks 2.4809 0.0 10.8161    
cufflinks 3.33481 0.0 13.6961    
cufflinks 2.34072 0.0 10.553    
cufflinks 0.0618954 0.0 0.2848 Low Low
cufflinks 0.0530405 0.0 0.251715 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0575571 0.0 0.272328 Low Low
cufflinks 11.0414 0.0 40.3424    
cufflinks 0.526272 0.0 2.46938 Low  

0 Strain