Gene : Phvul.007G271100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF30 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2570
Name:  ? Phvul.007G271100 Secondary Identifier:  ? PAC:37164925
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G271100 0.5kb upstream 0.5kb upstream 1370 true Chr07: 39226193-39227562 Phaseolus vulgaris
Phvul.007G271100 0.5kb upstream 0.5kb upstream 500 false Chr07: 39226193-39226692 Phaseolus vulgaris
Phvul.007G271100 0.5kb downstream 0.5kb downstream 1370 true Chr07: 39226693-39228062 Phaseolus vulgaris
Phvul.007G271100 0.5kb downstream 0.5kb downstream 500 false Chr07: 39227563-39228062 Phaseolus vulgaris
Phvul.007G271100 1.0kb upstream 1.0kb upstream 1870 true Chr07: 39225693-39227562 Phaseolus vulgaris
Phvul.007G271100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39225693-39226692 Phaseolus vulgaris
Phvul.007G271100 1.0kb downstream 1.0kb downstream 1870 true Chr07: 39226693-39228562 Phaseolus vulgaris
Phvul.007G271100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39227563-39228562 Phaseolus vulgaris
Phvul.007G271100 2.0kb upstream 2.0kb upstream 2870 true Chr07: 39224693-39227562 Phaseolus vulgaris
Phvul.007G271100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39224693-39226692 Phaseolus vulgaris
Phvul.007G271100 2.0kb downstream 2.0kb downstream 2870 true Chr07: 39226693-39229562 Phaseolus vulgaris
Phvul.007G271100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39227563-39229562 Phaseolus vulgaris
Phvul.007G271100 5.0kb upstream 5.0kb upstream 5870 true Chr07: 39221693-39227562 Phaseolus vulgaris
Phvul.007G271100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39221693-39226692 Phaseolus vulgaris
Phvul.007G271100 5.0kb downstream 5.0kb downstream 5870 true Chr07: 39226693-39232562 Phaseolus vulgaris
Phvul.007G271100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39227563-39232562 Phaseolus vulgaris
Phvul.007G271100 10.0kb upstream 10.0kb upstream 10870 true Chr07: 39216693-39227562 Phaseolus vulgaris
Phvul.007G271100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39216693-39226692 Phaseolus vulgaris
Phvul.007G271100 10.0kb downstream 10.0kb downstream 10870 true Chr07: 39226693-39237562 Phaseolus vulgaris
Phvul.007G271100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39227563-39237562 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041247 5273 Angiosperm View MSA
122306472 5265 Fabidae View MSA
124071107 5270 Rosid View MSA
123742298 5271 Pentapetalae View MSA
122794517 5272 Eudicot View MSA
121344205 5274 Embryophyte View MSA
123380001 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.91497 0.0 9.75401   Low
cufflinks 5.89228 0.0 18.3888    
cufflinks 3.395 0.0 11.2702   Low
cufflinks 11.3976 0.0 33.0958    
cufflinks 11.2791 0.0 32.6334    
cufflinks 5.66357 0.0 17.7583    
cufflinks 8.75206 0.0 26.1063    
cufflinks 8.02946 0.0 24.2368    
cufflinks 7.26966 0.0 22.3162    
cufflinks 2.80782 0.0 9.53701   Low
cufflinks 14.7489 0.0 41.6126   High

0 Strain