Gene : Phvul.005G131400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24096:SF236 - PROTEIN ACS-9 Genomic Order:  1322
Name:  ? Phvul.005G131400 Secondary Identifier:  ? PAC:37153164
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G131400 0.5kb upstream 0.5kb upstream 4629 true Chr05: 37002928-37007556 Phaseolus vulgaris
Phvul.005G131400 0.5kb upstream 0.5kb upstream 500 false Chr05: 37002928-37003427 Phaseolus vulgaris
Phvul.005G131400 0.5kb downstream 0.5kb downstream 4629 true Chr05: 37003428-37008056 Phaseolus vulgaris
Phvul.005G131400 0.5kb downstream 0.5kb downstream 500 false Chr05: 37007557-37008056 Phaseolus vulgaris
Phvul.005G131400 1.0kb upstream 1.0kb upstream 5129 true Chr05: 37002428-37007556 Phaseolus vulgaris
Phvul.005G131400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37002428-37003427 Phaseolus vulgaris
Phvul.005G131400 1.0kb downstream 1.0kb downstream 5129 true Chr05: 37003428-37008556 Phaseolus vulgaris
Phvul.005G131400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37007557-37008556 Phaseolus vulgaris
Phvul.005G131400 2.0kb upstream 2.0kb upstream 6129 true Chr05: 37001428-37007556 Phaseolus vulgaris
Phvul.005G131400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37001428-37003427 Phaseolus vulgaris
Phvul.005G131400 2.0kb downstream 2.0kb downstream 6129 true Chr05: 37003428-37009556 Phaseolus vulgaris
Phvul.005G131400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37007557-37009556 Phaseolus vulgaris
Phvul.005G131400 5.0kb upstream 5.0kb upstream 9129 true Chr05: 36998428-37007556 Phaseolus vulgaris
Phvul.005G131400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36998428-37003427 Phaseolus vulgaris
Phvul.005G131400 5.0kb downstream 5.0kb downstream 9129 true Chr05: 37003428-37012556 Phaseolus vulgaris
Phvul.005G131400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37007557-37012556 Phaseolus vulgaris
Phvul.005G131400 10.0kb upstream 10.0kb upstream 14129 true Chr05: 36993428-37007556 Phaseolus vulgaris
Phvul.005G131400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36993428-37003427 Phaseolus vulgaris
Phvul.005G131400 10.0kb downstream 10.0kb downstream 14129 true Chr05: 37003428-37017556 Phaseolus vulgaris
Phvul.005G131400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37007557-37017556 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314766 5265 Fabidae View MSA
124066794 5270 Rosid View MSA
123740977 5271 Pentapetalae View MSA
122792811 5272 Eudicot View MSA
122045114 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.6557 0.0 93.1865 High  
cufflinks 26.7689 0.0 69.2713    
cufflinks 14.9337 0.0 38.964    
cufflinks 19.325 0.0 49.9955    
cufflinks 12.7225 0.0 33.3731   Low
cufflinks 12.0793 0.0 31.8301   Low
cufflinks 39.3332 0.0 103.246 High High
cufflinks 19.9669 0.0 51.6575    
cufflinks 22.7797 0.0 58.8813    
cufflinks 71.4709 0.0 196.261 High High
cufflinks 16.0188 0.0 41.6154    

0 Strain