Gene : Phvul.007G275100 P. vulgaris v2.1
Defline:  (1 of 2) K01693 - imidazoleglycerol-phosphate dehydratase (hisB) Genomic Order:  2611
Name:  ? Phvul.007G275100 Secondary Identifier:  ? PAC:37166187
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris HISTSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G275100 0.5kb upstream 0.5kb upstream 3914 true Chr07: 39569118-39573031 Phaseolus vulgaris
Phvul.007G275100 0.5kb upstream 0.5kb upstream 500 false Chr07: 39569118-39569617 Phaseolus vulgaris
Phvul.007G275100 0.5kb downstream 0.5kb downstream 3914 true Chr07: 39569618-39573531 Phaseolus vulgaris
Phvul.007G275100 0.5kb downstream 0.5kb downstream 500 false Chr07: 39573032-39573531 Phaseolus vulgaris
Phvul.007G275100 1.0kb upstream 1.0kb upstream 4414 true Chr07: 39568618-39573031 Phaseolus vulgaris
Phvul.007G275100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39568618-39569617 Phaseolus vulgaris
Phvul.007G275100 1.0kb downstream 1.0kb downstream 4414 true Chr07: 39569618-39574031 Phaseolus vulgaris
Phvul.007G275100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39573032-39574031 Phaseolus vulgaris
Phvul.007G275100 2.0kb upstream 2.0kb upstream 5414 true Chr07: 39567618-39573031 Phaseolus vulgaris
Phvul.007G275100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39567618-39569617 Phaseolus vulgaris
Phvul.007G275100 2.0kb downstream 2.0kb downstream 5414 true Chr07: 39569618-39575031 Phaseolus vulgaris
Phvul.007G275100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39573032-39575031 Phaseolus vulgaris
Phvul.007G275100 5.0kb upstream 5.0kb upstream 8414 true Chr07: 39564618-39573031 Phaseolus vulgaris
Phvul.007G275100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39564618-39569617 Phaseolus vulgaris
Phvul.007G275100 5.0kb downstream 5.0kb downstream 8414 true Chr07: 39569618-39578031 Phaseolus vulgaris
Phvul.007G275100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39573032-39578031 Phaseolus vulgaris
Phvul.007G275100 10.0kb upstream 10.0kb upstream 13414 true Chr07: 39559618-39573031 Phaseolus vulgaris
Phvul.007G275100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39559618-39569617 Phaseolus vulgaris
Phvul.007G275100 10.0kb downstream 10.0kb downstream 13414 true Chr07: 39569618-39583031 Phaseolus vulgaris
Phvul.007G275100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39573032-39583031 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307930 5265 Fabidae View MSA
124067658 5270 Rosid View MSA
123737408 5271 Pentapetalae View MSA
122786767 5272 Eudicot View MSA
122045110 5273 Angiosperm View MSA
121344413 5274 Embryophyte View MSA
123423926 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2568 0.0 31.7236    
cufflinks 9.81375 0.0 28.1289    
cufflinks 19.6636 0.0 52.9738   High
cufflinks 15.0825 0.0 41.5381   High
cufflinks 9.9658 0.0 28.5973    
cufflinks 10.6449 0.0 30.3043    
cufflinks 6.91456 0.0 20.5969   Low
cufflinks 8.92232 0.0 25.8256    
cufflinks 8.31766 0.0 24.2993    
cufflinks 10.7223 0.0 30.4613    
cufflinks 12.2573 0.0 34.4833    

0 Strain