Gene : Phvul.005G134800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13027 - SAND PROTEIN-RELATED Genomic Order:  1357
Name:  ? Phvul.005G134800 Secondary Identifier:  ? PAC:37154473
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G134800 0.5kb upstream 0.5kb upstream 6306 true Chr05: 37539380-37545685 Phaseolus vulgaris
Phvul.005G134800 0.5kb upstream 0.5kb upstream 500 false Chr05: 37545186-37545685 Phaseolus vulgaris
Phvul.005G134800 0.5kb downstream 0.5kb downstream 6306 true Chr05: 37538880-37545185 Phaseolus vulgaris
Phvul.005G134800 0.5kb downstream 0.5kb downstream 500 false Chr05: 37538880-37539379 Phaseolus vulgaris
Phvul.005G134800 1.0kb upstream 1.0kb upstream 6806 true Chr05: 37539380-37546185 Phaseolus vulgaris
Phvul.005G134800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37545186-37546185 Phaseolus vulgaris
Phvul.005G134800 1.0kb downstream 1.0kb downstream 6806 true Chr05: 37538380-37545185 Phaseolus vulgaris
Phvul.005G134800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37538380-37539379 Phaseolus vulgaris
Phvul.005G134800 2.0kb upstream 2.0kb upstream 7806 true Chr05: 37539380-37547185 Phaseolus vulgaris
Phvul.005G134800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37545186-37547185 Phaseolus vulgaris
Phvul.005G134800 2.0kb downstream 2.0kb downstream 7806 true Chr05: 37537380-37545185 Phaseolus vulgaris
Phvul.005G134800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37537380-37539379 Phaseolus vulgaris
Phvul.005G134800 5.0kb upstream 5.0kb upstream 10806 true Chr05: 37539380-37550185 Phaseolus vulgaris
Phvul.005G134800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37545186-37550185 Phaseolus vulgaris
Phvul.005G134800 5.0kb downstream 5.0kb downstream 10806 true Chr05: 37534380-37545185 Phaseolus vulgaris
Phvul.005G134800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37534380-37539379 Phaseolus vulgaris
Phvul.005G134800 10.0kb upstream 10.0kb upstream 15806 true Chr05: 37539380-37555185 Phaseolus vulgaris
Phvul.005G134800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37545186-37555185 Phaseolus vulgaris
Phvul.005G134800 10.0kb downstream 10.0kb downstream 15806 true Chr05: 37529380-37545185 Phaseolus vulgaris
Phvul.005G134800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37529380-37539379 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310936 5265 Fabidae View MSA
124066322 5270 Rosid View MSA
123753489 5271 Pentapetalae View MSA
122789295 5272 Eudicot View MSA
122043673 5273 Angiosperm View MSA
121344284 5274 Embryophyte View MSA
123428228 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.71757 0.0 26.2997    
cufflinks 9.45988 0.0 25.722    
cufflinks 12.6007 0.0 33.4703   High
cufflinks 9.89122 0.0 26.7888    
cufflinks 11.318 0.0 30.3321    
cufflinks 8.81596 0.0 24.1185   Low
cufflinks 9.39554 0.0 25.5599    
cufflinks 9.26175 0.0 25.2295    
cufflinks 10.2266 0.0 27.6555    
cufflinks 15.4491 0.0 40.5456   High
cufflinks 11.9215 0.0 31.8725    

0 Strain