Gene : Phvul.007G278800 P. vulgaris v2.1
Genomic Order:  2648 Name:  ? Phvul.007G278800
Secondary Identifier:  ? PAC:37165623
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G278800 0.5kb upstream 0.5kb upstream 5017 true Chr07: 39846544-39851560 Phaseolus vulgaris
Phvul.007G278800 0.5kb upstream 0.5kb upstream 500 false Chr07: 39846544-39847043 Phaseolus vulgaris
Phvul.007G278800 0.5kb downstream 0.5kb downstream 5017 true Chr07: 39847044-39852060 Phaseolus vulgaris
Phvul.007G278800 0.5kb downstream 0.5kb downstream 500 false Chr07: 39851561-39852060 Phaseolus vulgaris
Phvul.007G278800 1.0kb upstream 1.0kb upstream 5517 true Chr07: 39846044-39851560 Phaseolus vulgaris
Phvul.007G278800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39846044-39847043 Phaseolus vulgaris
Phvul.007G278800 1.0kb downstream 1.0kb downstream 5517 true Chr07: 39847044-39852560 Phaseolus vulgaris
Phvul.007G278800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39851561-39852560 Phaseolus vulgaris
Phvul.007G278800 2.0kb upstream 2.0kb upstream 6517 true Chr07: 39845044-39851560 Phaseolus vulgaris
Phvul.007G278800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39845044-39847043 Phaseolus vulgaris
Phvul.007G278800 2.0kb downstream 2.0kb downstream 6517 true Chr07: 39847044-39853560 Phaseolus vulgaris
Phvul.007G278800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39851561-39853560 Phaseolus vulgaris
Phvul.007G278800 5.0kb upstream 5.0kb upstream 9517 true Chr07: 39842044-39851560 Phaseolus vulgaris
Phvul.007G278800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39842044-39847043 Phaseolus vulgaris
Phvul.007G278800 5.0kb downstream 5.0kb downstream 9517 true Chr07: 39847044-39856560 Phaseolus vulgaris
Phvul.007G278800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39851561-39856560 Phaseolus vulgaris
Phvul.007G278800 10.0kb upstream 10.0kb upstream 14517 true Chr07: 39837044-39851560 Phaseolus vulgaris
Phvul.007G278800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39837044-39847043 Phaseolus vulgaris
Phvul.007G278800 10.0kb downstream 10.0kb downstream 14517 true Chr07: 39847044-39861560 Phaseolus vulgaris
Phvul.007G278800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39851561-39861560 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312370 5265 Fabidae View MSA
124069614 5270 Rosid View MSA
123744834 5271 Pentapetalae View MSA
122796385 5272 Eudicot View MSA
122050058 5273 Angiosperm View MSA
121311712 5274 Embryophyte View MSA
123348975 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.863082 0.0 2.78977    
cufflinks 1.60515 0.0 4.8295    
cufflinks 1.02226 0.0 3.2192    
cufflinks 2.07542 0.0 6.14099    
cufflinks 1.16374 0.0 3.69148    
cufflinks 1.79301 0.0 5.3219    
cufflinks 3.2868 0.0 9.17102    
cufflinks 0.866697 0.0 2.77505    
cufflinks 9.51087 0.0 24.6783   High
cufflinks 0.103954 0.0 0.411152 Low Low
cufflinks 1.82912 0.0 5.47531    

0 Strain