Gene : Phvul.005G134300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR12136:SF41 - PLECKSTRIN HOMOLOGY (PH) AND LIPID-BINDING START DOMAIN-CONTAINING PROTEIN Genomic Order:  1352
Name:  ? Phvul.005G134300 Secondary Identifier:  ? PAC:37153143
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G134300 0.5kb upstream 0.5kb upstream 10842 true Chr05: 37445220-37456061 Phaseolus vulgaris
Phvul.005G134300 0.5kb upstream 0.5kb upstream 500 false Chr05: 37445220-37445719 Phaseolus vulgaris
Phvul.005G134300 0.5kb downstream 0.5kb downstream 10842 true Chr05: 37445720-37456561 Phaseolus vulgaris
Phvul.005G134300 0.5kb downstream 0.5kb downstream 500 false Chr05: 37456062-37456561 Phaseolus vulgaris
Phvul.005G134300 1.0kb upstream 1.0kb upstream 11342 true Chr05: 37444720-37456061 Phaseolus vulgaris
Phvul.005G134300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37444720-37445719 Phaseolus vulgaris
Phvul.005G134300 1.0kb downstream 1.0kb downstream 11342 true Chr05: 37445720-37457061 Phaseolus vulgaris
Phvul.005G134300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37456062-37457061 Phaseolus vulgaris
Phvul.005G134300 2.0kb upstream 2.0kb upstream 12342 true Chr05: 37443720-37456061 Phaseolus vulgaris
Phvul.005G134300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37443720-37445719 Phaseolus vulgaris
Phvul.005G134300 2.0kb downstream 2.0kb downstream 12342 true Chr05: 37445720-37458061 Phaseolus vulgaris
Phvul.005G134300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37456062-37458061 Phaseolus vulgaris
Phvul.005G134300 5.0kb upstream 5.0kb upstream 15342 true Chr05: 37440720-37456061 Phaseolus vulgaris
Phvul.005G134300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37440720-37445719 Phaseolus vulgaris
Phvul.005G134300 5.0kb downstream 5.0kb downstream 15342 true Chr05: 37445720-37461061 Phaseolus vulgaris
Phvul.005G134300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37456062-37461061 Phaseolus vulgaris
Phvul.005G134300 10.0kb upstream 10.0kb upstream 20342 true Chr05: 37435720-37456061 Phaseolus vulgaris
Phvul.005G134300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37435720-37445719 Phaseolus vulgaris
Phvul.005G134300 10.0kb downstream 10.0kb downstream 20342 true Chr05: 37445720-37466061 Phaseolus vulgaris
Phvul.005G134300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37456062-37466061 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307511 5265 Fabidae View MSA
124064744 5270 Rosid View MSA
123746336 5271 Pentapetalae View MSA
122790563 5272 Eudicot View MSA
122046452 5273 Angiosperm View MSA
121347989 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.34346 0.0 19.339    
cufflinks 5.53487 0.0 14.8866   Low
cufflinks 14.2462 0.0 36.8256    
cufflinks 5.43854 0.0 14.7249   Low
cufflinks 8.30589 0.0 21.813    
cufflinks 11.1404 0.0 28.8629    
cufflinks 10.2018 0.0 26.4773    
cufflinks 23.6238 0.0 61.9485   High
cufflinks 9.15597 0.0 23.8731    
cufflinks 11.1595 0.0 28.9192    
cufflinks 9.60359 0.0 25.0156    

0 Strain