Gene : Phvul.007G278100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33428:SF1 - CHLOROPHYLLASE-2, CHLOROPLASTIC Genomic Order:  2641
Name:  ? Phvul.007G278100 Secondary Identifier:  ? PAC:37164329
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5098 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6927 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G278100 0.5kb upstream 0.5kb upstream 3175 true Chr07: 39799498-39802672 Phaseolus vulgaris
Phvul.007G278100 0.5kb upstream 0.5kb upstream 500 false Chr07: 39799498-39799997 Phaseolus vulgaris
Phvul.007G278100 0.5kb downstream 0.5kb downstream 3175 true Chr07: 39799998-39803172 Phaseolus vulgaris
Phvul.007G278100 0.5kb downstream 0.5kb downstream 500 false Chr07: 39802673-39803172 Phaseolus vulgaris
Phvul.007G278100 1.0kb upstream 1.0kb upstream 3675 true Chr07: 39798998-39802672 Phaseolus vulgaris
Phvul.007G278100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39798998-39799997 Phaseolus vulgaris
Phvul.007G278100 1.0kb downstream 1.0kb downstream 3675 true Chr07: 39799998-39803672 Phaseolus vulgaris
Phvul.007G278100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39802673-39803672 Phaseolus vulgaris
Phvul.007G278100 2.0kb upstream 2.0kb upstream 4675 true Chr07: 39797998-39802672 Phaseolus vulgaris
Phvul.007G278100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39797998-39799997 Phaseolus vulgaris
Phvul.007G278100 2.0kb downstream 2.0kb downstream 4675 true Chr07: 39799998-39804672 Phaseolus vulgaris
Phvul.007G278100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39802673-39804672 Phaseolus vulgaris
Phvul.007G278100 5.0kb upstream 5.0kb upstream 7675 true Chr07: 39794998-39802672 Phaseolus vulgaris
Phvul.007G278100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39794998-39799997 Phaseolus vulgaris
Phvul.007G278100 5.0kb downstream 5.0kb downstream 7675 true Chr07: 39799998-39807672 Phaseolus vulgaris
Phvul.007G278100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39802673-39807672 Phaseolus vulgaris
Phvul.007G278100 10.0kb upstream 10.0kb upstream 12675 true Chr07: 39789998-39802672 Phaseolus vulgaris
Phvul.007G278100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39789998-39799997 Phaseolus vulgaris
Phvul.007G278100 10.0kb downstream 10.0kb downstream 12675 true Chr07: 39799998-39812672 Phaseolus vulgaris
Phvul.007G278100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39802673-39812672 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303758 5265 Fabidae View MSA
124065690 5270 Rosid View MSA
123737382 5271 Pentapetalae View MSA
122788570 5272 Eudicot View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4959 0.0 44.4471    
cufflinks 5.57696 0.0 16.6577    
cufflinks 51.259 0.0 132.818 High High
cufflinks 7.69323 0.0 22.3021    
cufflinks 6.45982 0.0 19.1678    
cufflinks 15.1425 0.0 40.9518    
cufflinks 0.0337859 0.0 0.165467 Low Low
cufflinks 0.0242075 0.0 0.122569 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.57256 0.0 21.9182    
cufflinks 6.89787 0.0 20.2689    

0 Strain