Gene : Phvul.005G120200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10625:SF121 - HISTONE DEACETYLASE 8 Genomic Order:  1207
Name:  ? Phvul.005G120200 Secondary Identifier:  ? PAC:37152896
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G120200 0.5kb upstream 0.5kb upstream 4328 true Chr05: 35652298-35656625 Phaseolus vulgaris
Phvul.005G120200 0.5kb upstream 0.5kb upstream 500 false Chr05: 35652298-35652797 Phaseolus vulgaris
Phvul.005G120200 0.5kb downstream 0.5kb downstream 4328 true Chr05: 35652798-35657125 Phaseolus vulgaris
Phvul.005G120200 0.5kb downstream 0.5kb downstream 500 false Chr05: 35656626-35657125 Phaseolus vulgaris
Phvul.005G120200 1.0kb upstream 1.0kb upstream 4828 true Chr05: 35651798-35656625 Phaseolus vulgaris
Phvul.005G120200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35651798-35652797 Phaseolus vulgaris
Phvul.005G120200 1.0kb downstream 1.0kb downstream 4828 true Chr05: 35652798-35657625 Phaseolus vulgaris
Phvul.005G120200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35656626-35657625 Phaseolus vulgaris
Phvul.005G120200 2.0kb upstream 2.0kb upstream 5828 true Chr05: 35650798-35656625 Phaseolus vulgaris
Phvul.005G120200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35650798-35652797 Phaseolus vulgaris
Phvul.005G120200 2.0kb downstream 2.0kb downstream 5828 true Chr05: 35652798-35658625 Phaseolus vulgaris
Phvul.005G120200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35656626-35658625 Phaseolus vulgaris
Phvul.005G120200 5.0kb upstream 5.0kb upstream 8828 true Chr05: 35647798-35656625 Phaseolus vulgaris
Phvul.005G120200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35647798-35652797 Phaseolus vulgaris
Phvul.005G120200 5.0kb downstream 5.0kb downstream 8828 true Chr05: 35652798-35661625 Phaseolus vulgaris
Phvul.005G120200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35656626-35661625 Phaseolus vulgaris
Phvul.005G120200 10.0kb upstream 10.0kb upstream 13828 true Chr05: 35642798-35656625 Phaseolus vulgaris
Phvul.005G120200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35642798-35652797 Phaseolus vulgaris
Phvul.005G120200 10.0kb downstream 10.0kb downstream 13828 true Chr05: 35652798-35666625 Phaseolus vulgaris
Phvul.005G120200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35656626-35666625 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299198 5265 Fabidae View MSA
124068185 5270 Rosid View MSA
123739606 5271 Pentapetalae View MSA
122786493 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.71177 0.0 17.0037    
cufflinks 4.41381 0.0 22.1904    
cufflinks 3.19455 0.0 12.822    
cufflinks 7.37475 0.0 28.7671   High
cufflinks 4.12035 0.0 15.7543    
cufflinks 3.33254 0.0 15.4368    
cufflinks 4.31092 0.0 18.6512    
cufflinks 9.4437 0.0 37.5812   High
cufflinks 2.63663 0.0 13.3095   Low
cufflinks 3.89465 0.0 17.5687    
cufflinks 3.49529 0.0 14.4364    

0 Strain