Gene : Phvul.005G120700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  1212
Name:  ? Phvul.005G120700 Secondary Identifier:  ? PAC:37152557
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G120700 0.5kb upstream 0.5kb upstream 8621 true Chr05: 35687056-35695676 Phaseolus vulgaris
Phvul.005G120700 0.5kb upstream 0.5kb upstream 500 false Chr05: 35687056-35687555 Phaseolus vulgaris
Phvul.005G120700 0.5kb downstream 0.5kb downstream 8621 true Chr05: 35687556-35696176 Phaseolus vulgaris
Phvul.005G120700 0.5kb downstream 0.5kb downstream 500 false Chr05: 35695677-35696176 Phaseolus vulgaris
Phvul.005G120700 1.0kb upstream 1.0kb upstream 9121 true Chr05: 35686556-35695676 Phaseolus vulgaris
Phvul.005G120700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35686556-35687555 Phaseolus vulgaris
Phvul.005G120700 1.0kb downstream 1.0kb downstream 9121 true Chr05: 35687556-35696676 Phaseolus vulgaris
Phvul.005G120700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35695677-35696676 Phaseolus vulgaris
Phvul.005G120700 2.0kb upstream 2.0kb upstream 10121 true Chr05: 35685556-35695676 Phaseolus vulgaris
Phvul.005G120700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35685556-35687555 Phaseolus vulgaris
Phvul.005G120700 2.0kb downstream 2.0kb downstream 10121 true Chr05: 35687556-35697676 Phaseolus vulgaris
Phvul.005G120700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35695677-35697676 Phaseolus vulgaris
Phvul.005G120700 5.0kb upstream 5.0kb upstream 13121 true Chr05: 35682556-35695676 Phaseolus vulgaris
Phvul.005G120700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35682556-35687555 Phaseolus vulgaris
Phvul.005G120700 5.0kb downstream 5.0kb downstream 13121 true Chr05: 35687556-35700676 Phaseolus vulgaris
Phvul.005G120700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35695677-35700676 Phaseolus vulgaris
Phvul.005G120700 10.0kb upstream 10.0kb upstream 18121 true Chr05: 35677556-35695676 Phaseolus vulgaris
Phvul.005G120700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35677556-35687555 Phaseolus vulgaris
Phvul.005G120700 10.0kb downstream 10.0kb downstream 18121 true Chr05: 35687556-35705676 Phaseolus vulgaris
Phvul.005G120700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35695677-35705676 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309247 5265 Fabidae View MSA
124063961 5270 Rosid View MSA
123747232 5271 Pentapetalae View MSA
122789599 5272 Eudicot View MSA
122047293 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.33207 0.0 10.1639   Low
cufflinks 9.35423 0.0 29.8495    
cufflinks 14.2759 0.0 45.3457    
cufflinks 5.85244 0.0 20.8459    
cufflinks 12.3523 0.0 47.4547    
cufflinks 15.0475 0.0 47.8439    
cufflinks 13.9825 0.0 52.0608    
cufflinks 10.319 0.0 38.3657    
cufflinks 14.8736 0.0 57.2104    
cufflinks 11.7899 0.0 45.6681    
cufflinks 10.7675 0.0 41.1159    

0 Strain