Gene : Phvul.005G123100 P. vulgaris v2.1
Defline:  (1 of 1) K12251 - N-carbamoylputrescine amidase (aguB) Genomic Order:  1235
Name:  ? Phvul.005G123100 Secondary Identifier:  ? PAC:37153751
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris POLYAMINSYN3-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-43 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G123100 0.5kb upstream 0.5kb upstream 5168 true Chr05: 36030513-36035680 Phaseolus vulgaris
Phvul.005G123100 0.5kb upstream 0.5kb upstream 500 false Chr05: 36030513-36031012 Phaseolus vulgaris
Phvul.005G123100 0.5kb downstream 0.5kb downstream 5168 true Chr05: 36031013-36036180 Phaseolus vulgaris
Phvul.005G123100 0.5kb downstream 0.5kb downstream 500 false Chr05: 36035681-36036180 Phaseolus vulgaris
Phvul.005G123100 1.0kb upstream 1.0kb upstream 5668 true Chr05: 36030013-36035680 Phaseolus vulgaris
Phvul.005G123100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36030013-36031012 Phaseolus vulgaris
Phvul.005G123100 1.0kb downstream 1.0kb downstream 5668 true Chr05: 36031013-36036680 Phaseolus vulgaris
Phvul.005G123100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36035681-36036680 Phaseolus vulgaris
Phvul.005G123100 2.0kb upstream 2.0kb upstream 6668 true Chr05: 36029013-36035680 Phaseolus vulgaris
Phvul.005G123100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36029013-36031012 Phaseolus vulgaris
Phvul.005G123100 2.0kb downstream 2.0kb downstream 6668 true Chr05: 36031013-36037680 Phaseolus vulgaris
Phvul.005G123100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36035681-36037680 Phaseolus vulgaris
Phvul.005G123100 5.0kb upstream 5.0kb upstream 9668 true Chr05: 36026013-36035680 Phaseolus vulgaris
Phvul.005G123100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36026013-36031012 Phaseolus vulgaris
Phvul.005G123100 5.0kb downstream 5.0kb downstream 9668 true Chr05: 36031013-36040680 Phaseolus vulgaris
Phvul.005G123100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36035681-36040680 Phaseolus vulgaris
Phvul.005G123100 10.0kb upstream 10.0kb upstream 14668 true Chr05: 36021013-36035680 Phaseolus vulgaris
Phvul.005G123100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36021013-36031012 Phaseolus vulgaris
Phvul.005G123100 10.0kb downstream 10.0kb downstream 14668 true Chr05: 36031013-36045680 Phaseolus vulgaris
Phvul.005G123100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36035681-36045680 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303763 5265 Fabidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7602 0.0 36.6728    
cufflinks 11.0189 0.0 29.9511    
cufflinks 13.7503 0.0 36.6699    
cufflinks 19.4681 0.0 51.075   High
cufflinks 8.90244 0.0 24.8574   Low
cufflinks 11.5803 0.0 31.3116    
cufflinks 10.324 0.0 28.2206    
cufflinks 14.0368 0.0 37.2794    
cufflinks 11.1613 0.0 30.351    
cufflinks 8.87383 0.0 24.637   Low
cufflinks 10.5039 0.0 28.8237    

0 Strain