Gene : Phvul.007G264600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24007 - BRCA1-ASSOCIATED PROTEIN Genomic Order:  2505
Name:  ? Phvul.007G264600 Secondary Identifier:  ? PAC:37165735
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G264600 0.5kb upstream 0.5kb upstream 3864 true Chr07: 38573515-38577378 Phaseolus vulgaris
Phvul.007G264600 0.5kb upstream 0.5kb upstream 500 false Chr07: 38573515-38574014 Phaseolus vulgaris
Phvul.007G264600 0.5kb downstream 0.5kb downstream 3864 true Chr07: 38574015-38577878 Phaseolus vulgaris
Phvul.007G264600 0.5kb downstream 0.5kb downstream 500 false Chr07: 38577379-38577878 Phaseolus vulgaris
Phvul.007G264600 1.0kb upstream 1.0kb upstream 4364 true Chr07: 38573015-38577378 Phaseolus vulgaris
Phvul.007G264600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38573015-38574014 Phaseolus vulgaris
Phvul.007G264600 1.0kb downstream 1.0kb downstream 4364 true Chr07: 38574015-38578378 Phaseolus vulgaris
Phvul.007G264600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38577379-38578378 Phaseolus vulgaris
Phvul.007G264600 2.0kb upstream 2.0kb upstream 5364 true Chr07: 38572015-38577378 Phaseolus vulgaris
Phvul.007G264600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38572015-38574014 Phaseolus vulgaris
Phvul.007G264600 2.0kb downstream 2.0kb downstream 5364 true Chr07: 38574015-38579378 Phaseolus vulgaris
Phvul.007G264600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38577379-38579378 Phaseolus vulgaris
Phvul.007G264600 5.0kb upstream 5.0kb upstream 8364 true Chr07: 38569015-38577378 Phaseolus vulgaris
Phvul.007G264600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38569015-38574014 Phaseolus vulgaris
Phvul.007G264600 5.0kb downstream 5.0kb downstream 8364 true Chr07: 38574015-38582378 Phaseolus vulgaris
Phvul.007G264600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38577379-38582378 Phaseolus vulgaris
Phvul.007G264600 10.0kb upstream 10.0kb upstream 13364 true Chr07: 38564015-38577378 Phaseolus vulgaris
Phvul.007G264600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38564015-38574014 Phaseolus vulgaris
Phvul.007G264600 10.0kb downstream 10.0kb downstream 13364 true Chr07: 38574015-38587378 Phaseolus vulgaris
Phvul.007G264600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38577379-38587378 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122314962 5265 Fabidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.148773 0.0 0.639725 Low  
cufflinks 0.143345 0.0 0.620454 Low  
cufflinks 1.12922 0.0 4.09805    
cufflinks 0.567568 0.0 2.21671    
cufflinks 1.5317 0.0 5.5062   High
cufflinks 0.389197 0.0 1.54619 Low  
cufflinks 0.64747 0.0 2.47678    
cufflinks 0.113697 0.0 0.497841 Low  
cufflinks 0.768834 0.0 2.90818    
cufflinks 0.0205609 0.0 0.109978 Low Low
cufflinks 0.794506 0.0 3.01024    

0 Strain