Gene : Phvul.005G123700 P. vulgaris v2.1
Defline:  (1 of 2) K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Genomic Order:  1241
Name:  ? Phvul.005G123700 Secondary Identifier:  ? PAC:37153860
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G123700 0.5kb upstream 0.5kb upstream 2436 true Chr05: 36074164-36076599 Phaseolus vulgaris
Phvul.005G123700 0.5kb upstream 0.5kb upstream 500 false Chr05: 36076100-36076599 Phaseolus vulgaris
Phvul.005G123700 0.5kb downstream 0.5kb downstream 2436 true Chr05: 36073664-36076099 Phaseolus vulgaris
Phvul.005G123700 0.5kb downstream 0.5kb downstream 500 false Chr05: 36073664-36074163 Phaseolus vulgaris
Phvul.005G123700 1.0kb upstream 1.0kb upstream 2936 true Chr05: 36074164-36077099 Phaseolus vulgaris
Phvul.005G123700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36076100-36077099 Phaseolus vulgaris
Phvul.005G123700 1.0kb downstream 1.0kb downstream 2936 true Chr05: 36073164-36076099 Phaseolus vulgaris
Phvul.005G123700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36073164-36074163 Phaseolus vulgaris
Phvul.005G123700 2.0kb upstream 2.0kb upstream 3936 true Chr05: 36074164-36078099 Phaseolus vulgaris
Phvul.005G123700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36076100-36078099 Phaseolus vulgaris
Phvul.005G123700 2.0kb downstream 2.0kb downstream 3936 true Chr05: 36072164-36076099 Phaseolus vulgaris
Phvul.005G123700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36072164-36074163 Phaseolus vulgaris
Phvul.005G123700 5.0kb upstream 5.0kb upstream 6936 true Chr05: 36074164-36081099 Phaseolus vulgaris
Phvul.005G123700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36076100-36081099 Phaseolus vulgaris
Phvul.005G123700 5.0kb downstream 5.0kb downstream 6936 true Chr05: 36069164-36076099 Phaseolus vulgaris
Phvul.005G123700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36069164-36074163 Phaseolus vulgaris
Phvul.005G123700 10.0kb upstream 10.0kb upstream 11936 true Chr05: 36074164-36086099 Phaseolus vulgaris
Phvul.005G123700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36076100-36086099 Phaseolus vulgaris
Phvul.005G123700 10.0kb downstream 10.0kb downstream 11936 true Chr05: 36064164-36076099 Phaseolus vulgaris
Phvul.005G123700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36064164-36074163 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304338 5265 Fabidae View MSA
124062102 5270 Rosid View MSA
123750520 5271 Pentapetalae View MSA
122788879 5272 Eudicot View MSA
122041557 5273 Angiosperm View MSA
121346293 5274 Embryophyte View MSA
123424403 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 151.181 0.0 412.397 High  
cufflinks 228.897 0.0 651.662 High High
cufflinks 83.5898 0.0 218.512 High Low
cufflinks 187.342 0.0 517.599 High High
cufflinks 123.498 0.0 329.185 High  
cufflinks 77.2025 0.0 201.031 High Low
cufflinks 106.272 0.0 281.579 High  
cufflinks 113.523 0.0 303.229 High  
cufflinks 161.424 0.0 441.903 High  
cufflinks 118.489 0.0 315.968 High  
cufflinks 130.371 0.0 349.672 High  

0 Strain