Gene : Phvul.005G123800 P. vulgaris v2.1
Genomic Order:  1242 Name:  ? Phvul.005G123800
Secondary Identifier:  ? PAC:37153656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G123800 0.5kb upstream 0.5kb upstream 896 true Chr05: 36087411-36088306 Phaseolus vulgaris
Phvul.005G123800 0.5kb upstream 0.5kb upstream 500 false Chr05: 36087807-36088306 Phaseolus vulgaris
Phvul.005G123800 0.5kb downstream 0.5kb downstream 896 true Chr05: 36086911-36087806 Phaseolus vulgaris
Phvul.005G123800 0.5kb downstream 0.5kb downstream 500 false Chr05: 36086911-36087410 Phaseolus vulgaris
Phvul.005G123800 1.0kb upstream 1.0kb upstream 1396 true Chr05: 36087411-36088806 Phaseolus vulgaris
Phvul.005G123800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36087807-36088806 Phaseolus vulgaris
Phvul.005G123800 1.0kb downstream 1.0kb downstream 1396 true Chr05: 36086411-36087806 Phaseolus vulgaris
Phvul.005G123800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36086411-36087410 Phaseolus vulgaris
Phvul.005G123800 2.0kb upstream 2.0kb upstream 2396 true Chr05: 36087411-36089806 Phaseolus vulgaris
Phvul.005G123800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36087807-36089806 Phaseolus vulgaris
Phvul.005G123800 2.0kb downstream 2.0kb downstream 2396 true Chr05: 36085411-36087806 Phaseolus vulgaris
Phvul.005G123800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36085411-36087410 Phaseolus vulgaris
Phvul.005G123800 5.0kb upstream 5.0kb upstream 5396 true Chr05: 36087411-36092806 Phaseolus vulgaris
Phvul.005G123800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36087807-36092806 Phaseolus vulgaris
Phvul.005G123800 5.0kb downstream 5.0kb downstream 5396 true Chr05: 36082411-36087806 Phaseolus vulgaris
Phvul.005G123800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36082411-36087410 Phaseolus vulgaris
Phvul.005G123800 10.0kb upstream 10.0kb upstream 10396 true Chr05: 36087411-36097806 Phaseolus vulgaris
Phvul.005G123800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36087807-36097806 Phaseolus vulgaris
Phvul.005G123800 10.0kb downstream 10.0kb downstream 10396 true Chr05: 36077411-36087806 Phaseolus vulgaris
Phvul.005G123800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36077411-36087410 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254024 5265 Fabidae View MSA
124068213 5270 Rosid View MSA
123748215 5271 Pentapetalae View MSA
122795836 5272 Eudicot View MSA
122048634 5273 Angiosperm View MSA
121350255 5274 Embryophyte View MSA
123381647 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5043 0.0 69.2682    
cufflinks 2.24013 0.0 8.68909   Low
cufflinks 84.2975 0.0 227.098 High High
cufflinks 5.27554 0.0 18.9579    
cufflinks 6.23834 0.0 22.4257    
cufflinks 38.4029 0.0 111.293 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.9233 0.0 11.161   Low
cufflinks 14.2735 0.0 46.5407    

0 Strain